TKFC Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TKFC Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TKFC Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TKFC Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TKFC Up.

Results found

Linked to

	Label	Description
	MRPS7 Gene (Entity type)	ENSG00000125445 - mitochondrial ribosomal protein S7
	SDHAF3 Gene (Entity type)	ENSG00000196636 - succinate dehydrogenase complex assembly factor 3
	DYNC1I1 Gene (Entity type)	ENSG00000158560 - dynein cytoplasmic 1 intermediate chain 1
	ARHGEF9 Gene (Entity type)	ENSG00000131089 - Cdc42 guanine nucleotide exchange factor 9
	LSM4 Gene (Entity type)	ENSG00000130520 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
	TMEM168 Gene (Entity type)	ENSG00000146802 - transmembrane protein 168
	MT3 Gene (Entity type)	ENSG00000087250 - metallothionein 3
	ARB2A Gene (Entity type)	ENSG00000113391 - ARB2 cotranscriptional regulator A
	MRPL20 Gene (Entity type)	ENSG00000242485 - mitochondrial ribosomal protein L20
	TIPRL Gene (Entity type)	ENSG00000143155 - TOR signaling pathway regulator

MRPS7

Gene (Entity type)

ENSG00000125445 - mitochondrial ribosomal protein S7

SDHAF3

Gene (Entity type)

ENSG00000196636 - succinate dehydrogenase complex assembly factor 3

DYNC1I1

Gene (Entity type)

ENSG00000158560 - dynein cytoplasmic 1 intermediate chain 1

ARHGEF9

Gene (Entity type)

ENSG00000131089 - Cdc42 guanine nucleotide exchange factor 9

LSM4

Gene (Entity type)

ENSG00000130520 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated

TMEM168

Gene (Entity type)

ENSG00000146802 - transmembrane protein 168

MT3

Gene (Entity type)

ENSG00000087250 - metallothionein 3

ARB2A

Gene (Entity type)

ENSG00000113391 - ARB2 cotranscriptional regulator A

MRPL20

Gene (Entity type)

ENSG00000242485 - mitochondrial ribosomal protein L20

TIPRL

Gene (Entity type)

ENSG00000143155 - TOR signaling pathway regulator

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.