GSE207871 NPC knockdown S18 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE207871_NPC knockdown_S18_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE207871_NPC knockdown_S18_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE207871_NPC knockdown_S18_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE207871_NPC knockdown_S18_1_v_0_human_up.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	CAT Gene (Entity type)	ENSG00000121691 - catalase
	DAP Gene (Entity type)	ENSG00000112977 - death associated protein
	PLCG1 Gene (Entity type)	ENSG00000124181 - phospholipase C gamma 1
	ADCY3 Gene (Entity type)	ENSG00000138031 - adenylate cyclase 3
	DYNLL2 Gene (Entity type)	ENSG00000264364 - dynein light chain LC8-type 2
	MCCC1 Gene (Entity type)	ENSG00000078070 - methylcrotonyl-CoA carboxylase subunit 1
	CHAF1B Gene (Entity type)	ENSG00000159259 - chromatin assembly factor 1 subunit B
	B4GALT4 Gene (Entity type)	ENSG00000121578 - beta-1,4-galactosyltransferase 4

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

CAT

Gene (Entity type)

ENSG00000121691 - catalase

DAP

Gene (Entity type)

ENSG00000112977 - death associated protein

PLCG1

Gene (Entity type)

ENSG00000124181 - phospholipase C gamma 1

ADCY3

Gene (Entity type)

ENSG00000138031 - adenylate cyclase 3

DYNLL2

Gene (Entity type)

ENSG00000264364 - dynein light chain LC8-type 2

MCCC1

Gene (Entity type)

ENSG00000078070 - methylcrotonyl-CoA carboxylase subunit 1

CHAF1B

Gene (Entity type)

ENSG00000159259 - chromatin assembly factor 1 subunit B

B4GALT4

Gene (Entity type)

ENSG00000121578 - beta-1,4-galactosyltransferase 4

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.