PBK Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PBK Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PBK Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PBK Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PBK Down.

Results found

Linked to

	Label	Description
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	ASPA Gene (Entity type)	ENSG00000108381 - aspartoacylase
	CASD1 Gene (Entity type)	ENSG00000127995 - CAS1 domain sialic acid O acetyltransferase 1
	TOB2 Gene (Entity type)	ENSG00000183864 - transducer of ERBB2, 2
	CORO2B Gene (Entity type)	ENSG00000103647 - coronin 2B
	ELOVL1 Gene (Entity type)	ENSG00000066322 - ELOVL fatty acid elongase 1
	TM6SF1 Gene (Entity type)	ENSG00000136404 - transmembrane 6 superfamily member 1
	SEC23B Gene (Entity type)	ENSG00000101310 - SEC23 homolog B, COPII component
	ESF1 Gene (Entity type)	ENSG00000089048 - ESF1 nucleolar pre-rRNA processing protein
	CSNK2A1 Gene (Entity type)	ENSG00000101266 - casein kinase 2 alpha 1

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

ASPA

Gene (Entity type)

ENSG00000108381 - aspartoacylase

CASD1

Gene (Entity type)

ENSG00000127995 - CAS1 domain sialic acid O acetyltransferase 1

TOB2

Gene (Entity type)

ENSG00000183864 - transducer of ERBB2, 2

CORO2B

Gene (Entity type)

ENSG00000103647 - coronin 2B

ELOVL1

Gene (Entity type)

ENSG00000066322 - ELOVL fatty acid elongase 1

TM6SF1

Gene (Entity type)

ENSG00000136404 - transmembrane 6 superfamily member 1

SEC23B

Gene (Entity type)

ENSG00000101310 - SEC23 homolog B, COPII component

ESF1

Gene (Entity type)

ENSG00000089048 - ESF1 nucleolar pre-rRNA processing protein

CSNK2A1

Gene (Entity type)

ENSG00000101266 - casein kinase 2 alpha 1

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.