MALL Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MALL Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MALL Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MALL Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MALL Up.

Results found

Linked to

	Label	Description
	MED1 Gene (Entity type)	ENSG00000125686 - mediator complex subunit 1
	MSANTD2 Gene (Entity type)	ENSG00000120458 - Myb/SANT DNA binding domain containing 2
	ANKS1A Gene (Entity type)	ENSG00000064999 - ankyrin repeat and sterile alpha motif domain containing 1A
	RUNX1T1 Gene (Entity type)	ENSG00000079102 - RUNX1 partner transcriptional co-repressor 1
	MTMR1 Gene (Entity type)	ENSG00000063601 - myotubularin related protein 1
	SLK Gene (Entity type)	ENSG00000065613 - STE20 like kinase
	PSMC2 Gene (Entity type)	ENSG00000161057 - proteasome 26S subunit, ATPase 2
	SERF2 Gene (Entity type)	ENSG00000140264 - small EDRK-rich factor 2
	USO1 Gene (Entity type)	ENSG00000138768 - USO1 vesicle transport factor
	CES3 Gene (Entity type)	ENSG00000172828 - carboxylesterase 3

MED1

Gene (Entity type)

ENSG00000125686 - mediator complex subunit 1

MSANTD2

Gene (Entity type)

ENSG00000120458 - Myb/SANT DNA binding domain containing 2

ANKS1A

Gene (Entity type)

ENSG00000064999 - ankyrin repeat and sterile alpha motif domain containing 1A

RUNX1T1

Gene (Entity type)

ENSG00000079102 - RUNX1 partner transcriptional co-repressor 1

MTMR1

Gene (Entity type)

ENSG00000063601 - myotubularin related protein 1

SLK

Gene (Entity type)

ENSG00000065613 - STE20 like kinase

PSMC2

Gene (Entity type)

ENSG00000161057 - proteasome 26S subunit, ATPase 2

SERF2

Gene (Entity type)

ENSG00000140264 - small EDRK-rich factor 2

USO1

Gene (Entity type)

ENSG00000138768 - USO1 vesicle transport factor

CES3

Gene (Entity type)

ENSG00000172828 - carboxylesterase 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.