FN3KRP Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with FN3KRP Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with FN3KRP Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with FN3KRP Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with FN3KRP Up.

Results found

Linked to

	Label	Description
	CIAO2B Gene (Entity type)	ENSG00000166595 - cytosolic iron-sulfur assembly component 2B
	ME3 Gene (Entity type)	ENSG00000151376 - malic enzyme 3
	ZNF32 Gene (Entity type)	ENSG00000169740 - zinc finger protein 32
	STOML2 Gene (Entity type)	ENSG00000165283 - stomatin like 2
	COPZ1 Gene (Entity type)	ENSG00000111481 - coat protein complex I subunit zeta 1
	MGMT Gene (Entity type)	ENSG00000170430 - O-6-methylguanine-DNA methyltransferase
	NDUFB2 Gene (Entity type)	ENSG00000090266 - NADH:ubiquinone oxidoreductase subunit B2
	COMMD4 Gene (Entity type)	ENSG00000140365 - COMM domain containing 4
	CHCHD2 Gene (Entity type)	ENSG00000106153 - coiled-coil-helix-coiled-coil-helix domain containing 2
	REL Gene (Entity type)	ENSG00000162924 - REL proto-oncogene, NF-kB subunit

CIAO2B

Gene (Entity type)

ENSG00000166595 - cytosolic iron-sulfur assembly component 2B

ME3

Gene (Entity type)

ENSG00000151376 - malic enzyme 3

ZNF32

Gene (Entity type)

ENSG00000169740 - zinc finger protein 32

STOML2

Gene (Entity type)

ENSG00000165283 - stomatin like 2

COPZ1

Gene (Entity type)

ENSG00000111481 - coat protein complex I subunit zeta 1

MGMT

Gene (Entity type)

ENSG00000170430 - O-6-methylguanine-DNA methyltransferase

NDUFB2

Gene (Entity type)

ENSG00000090266 - NADH:ubiquinone oxidoreductase subunit B2

COMMD4

Gene (Entity type)

ENSG00000140365 - COMM domain containing 4

CHCHD2

Gene (Entity type)

ENSG00000106153 - coiled-coil-helix-coiled-coil-helix domain containing 2

REL

Gene (Entity type)

ENSG00000162924 - REL proto-oncogene, NF-kB subunit

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.