SH3BP4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SH3BP4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SH3BP4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SH3BP4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SH3BP4 Up.

Results found

Linked to

	Label	Description
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	MAPK9 Gene (Entity type)	ENSG00000050748 - mitogen-activated protein kinase 9
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	ATF6 Gene (Entity type)	ENSG00000118217 - activating transcription factor 6
	NUP155 Gene (Entity type)	ENSG00000113569 - nucleoporin 155
	KHNYN Gene (Entity type)	ENSG00000100441 - KH and NYN domain containing
	SNX13 Gene (Entity type)	ENSG00000071189 - sorting nexin 13
	BCL2L2 Gene (Entity type)	ENSG00000129473 - BCL2 like 2
	CSNK2A1 Gene (Entity type)	ENSG00000101266 - casein kinase 2 alpha 1
	ERC1 Gene (Entity type)	ENSG00000082805 - ELKS/RAB6-interacting/CAST family member 1

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

MAPK9

Gene (Entity type)

ENSG00000050748 - mitogen-activated protein kinase 9

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

ATF6

Gene (Entity type)

ENSG00000118217 - activating transcription factor 6

NUP155

Gene (Entity type)

ENSG00000113569 - nucleoporin 155

KHNYN

Gene (Entity type)

ENSG00000100441 - KH and NYN domain containing

SNX13

Gene (Entity type)

ENSG00000071189 - sorting nexin 13

BCL2L2

Gene (Entity type)

ENSG00000129473 - BCL2 like 2

CSNK2A1

Gene (Entity type)

ENSG00000101266 - casein kinase 2 alpha 1

ERC1

Gene (Entity type)

ENSG00000082805 - ELKS/RAB6-interacting/CAST family member 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.