SEMA3F Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SEMA3F Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SEMA3F Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SEMA3F Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SEMA3F Up.

Results found

Linked to

	Label	Description
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	SEC16A Gene (Entity type)	ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor
	VPS51 Gene (Entity type)	ENSG00000149823 - VPS51 subunit of GARP complex
	MDH2 Gene (Entity type)	ENSG00000146701 - malate dehydrogenase 2
	MAD1L1 Gene (Entity type)	ENSG00000002822 - mitotic arrest deficient 1 like 1
	COLGALT2 Gene (Entity type)	ENSG00000198756 - collagen beta(1-O)galactosyltransferase 2
	POMZP3 Gene (Entity type)	ENSG00000146707 - POM121 and ZP3 fusion
	NDUFV1 Gene (Entity type)	ENSG00000167792 - NADH:ubiquinone oxidoreductase core subunit V1
	MYO1F Gene (Entity type)	ENSG00000142347 - myosin IF
	ERCC1 Gene (Entity type)	ENSG00000012061 - ERCC excision repair 1, endonuclease non-catalytic subunit

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

SEC16A

Gene (Entity type)

ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor

VPS51

Gene (Entity type)

ENSG00000149823 - VPS51 subunit of GARP complex

MDH2

Gene (Entity type)

ENSG00000146701 - malate dehydrogenase 2

MAD1L1

Gene (Entity type)

ENSG00000002822 - mitotic arrest deficient 1 like 1

COLGALT2

Gene (Entity type)

ENSG00000198756 - collagen beta(1-O)galactosyltransferase 2

POMZP3

Gene (Entity type)

ENSG00000146707 - POM121 and ZP3 fusion

NDUFV1

Gene (Entity type)

ENSG00000167792 - NADH:ubiquinone oxidoreductase core subunit V1

MYO1F

Gene (Entity type)

ENSG00000142347 - myosin IF

ERCC1

Gene (Entity type)

ENSG00000012061 - ERCC excision repair 1, endonuclease non-catalytic subunit

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.