GSE112345 GSE112346 INS knockdown RNA Small Interfering 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE112345_GSE112346_INS knockdown_RNA Small Interfering_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE112345_GSE112346_INS knockdown_RNA Small Interfering_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE112345_GSE112346_INS knockdown_RNA Small Interfering_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE112345_GSE112346_INS knockdown_RNA Small Interfering_0_v_1_human_up.

Results found

Linked to

	Label	Description
	H3-3A Gene (Entity type)	H3.3 histone A
	H2AC19 Gene (Entity type)	H2A clustered histone 19
	MTCO2P12 Gene (Entity type)	MT-CO2 pseudogene 12
	MALAT1 Gene (Entity type)	metastasis associated lung adenocarcinoma transcript 1
	PAXX Gene (Entity type)	PAXX non-homologous end joining factor
	RPS2P5 Gene (Entity type)	ribosomal protein S2 pseudogene 5
	NAMPTP1 Gene (Entity type)	nicotinamide phosphoribosyltransferase pseudogene 1
	WASH8P Gene (Entity type)	WAS protein family homolog 8, pseudogene
	LSP1P5 Gene (Entity type)	LSP1 pseudogene 5
	LOC729998 Gene (Entity type)	eukaryotic translation elongation factor 1 gamma pseudogene

H3-3A

Gene (Entity type)

H3.3 histone A

H2AC19

Gene (Entity type)

H2A clustered histone 19

MTCO2P12

Gene (Entity type)

MT-CO2 pseudogene 12

MALAT1

Gene (Entity type)

metastasis associated lung adenocarcinoma transcript 1

PAXX

Gene (Entity type)

PAXX non-homologous end joining factor

RPS2P5

Gene (Entity type)

ribosomal protein S2 pseudogene 5

NAMPTP1

Gene (Entity type)

nicotinamide phosphoribosyltransferase pseudogene 1

WASH8P

Gene (Entity type)

WAS protein family homolog 8, pseudogene

LSP1P5

Gene (Entity type)

LSP1 pseudogene 5

LOC729998

Gene (Entity type)

eukaryotic translation elongation factor 1 gamma pseudogene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.