RCSD1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RCSD1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RCSD1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RCSD1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RCSD1 Up.

Results found

Linked to

	Label	Description
	USP9X Gene (Entity type)	ENSG00000124486 - ubiquitin specific peptidase 9 X-linked
	MDH1 Gene (Entity type)	ENSG00000014641 - malate dehydrogenase 1
	TRAF3 Gene (Entity type)	ENSG00000131323 - TNF receptor associated factor 3
	SEC24A Gene (Entity type)	ENSG00000113615 - SEC24 homolog A, COPII component
	WWOX Gene (Entity type)	ENSG00000186153 - WW domain containing oxidoreductase
	DROSHA Gene (Entity type)	ENSG00000113360 - drosha ribonuclease III
	RPL12 Gene (Entity type)	ENSG00000197958 - ribosomal protein L12
	SLC25A3 Gene (Entity type)	ENSG00000075415 - solute carrier family 25 member 3
	MTMR4 Gene (Entity type)	ENSG00000108389 - myotubularin related protein 4
	HMBOX1 Gene (Entity type)	ENSG00000147421 - homeobox containing 1

USP9X

Gene (Entity type)

ENSG00000124486 - ubiquitin specific peptidase 9 X-linked

MDH1

Gene (Entity type)

ENSG00000014641 - malate dehydrogenase 1

TRAF3

Gene (Entity type)

ENSG00000131323 - TNF receptor associated factor 3

SEC24A

Gene (Entity type)

ENSG00000113615 - SEC24 homolog A, COPII component

WWOX

Gene (Entity type)

ENSG00000186153 - WW domain containing oxidoreductase

DROSHA

Gene (Entity type)

ENSG00000113360 - drosha ribonuclease III

RPL12

Gene (Entity type)

ENSG00000197958 - ribosomal protein L12

SLC25A3

Gene (Entity type)

ENSG00000075415 - solute carrier family 25 member 3

MTMR4

Gene (Entity type)

ENSG00000108389 - myotubularin related protein 4

HMBOX1

Gene (Entity type)

ENSG00000147421 - homeobox containing 1

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.