NID1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NID1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NID1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NID1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NID1 Up.

Results found

Linked to

	Label	Description
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	COX7A2 Gene (Entity type)	ENSG00000112695 - cytochrome c oxidase subunit 7A2
	GABARAPL2 Gene (Entity type)	ENSG00000034713 - GABA type A receptor associated protein like 2
	ELOB Gene (Entity type)	ENSG00000103363 - elongin B
	EMC3 Gene (Entity type)	ENSG00000125037 - ER membrane protein complex subunit 3
	GNG5 Gene (Entity type)	ENSG00000174021 - G protein subunit gamma 5
	SMAP1 Gene (Entity type)	ENSG00000112305 - small ArfGAP 1
	RPS25 Gene (Entity type)	ENSG00000118181 - ribosomal protein S25
	GLRX3 Gene (Entity type)	ENSG00000108010 - glutaredoxin 3

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

COX7A2

Gene (Entity type)

ENSG00000112695 - cytochrome c oxidase subunit 7A2

GABARAPL2

Gene (Entity type)

ENSG00000034713 - GABA type A receptor associated protein like 2

ELOB

Gene (Entity type)

ENSG00000103363 - elongin B

EMC3

Gene (Entity type)

ENSG00000125037 - ER membrane protein complex subunit 3

GNG5

Gene (Entity type)

ENSG00000174021 - G protein subunit gamma 5

SMAP1

Gene (Entity type)

ENSG00000112305 - small ArfGAP 1

RPS25

Gene (Entity type)

ENSG00000118181 - ribosomal protein S25

GLRX3

Gene (Entity type)

ENSG00000108010 - glutaredoxin 3

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.