GSE125956 SYK knockdown 0 v 5 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE125956_SYK knockdown_0_v_5_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE125956_SYK knockdown_0_v_5_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE125956_SYK knockdown_0_v_5_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE125956_SYK knockdown_0_v_5_human_up.

Results found

Linked to

	Label	Description
	SNHG8 Gene (Entity type)	small nucleolar RNA host gene 8
	AFAP1-AS1 Gene (Entity type)	AFAP1 antisense RNA 1
	ZNF232-AS1 Gene (Entity type)	ZNF232 antisense RNA 1
	LINC02982 Gene (Entity type)	long intergenic non-protein coding RNA 2982
	MELTF-AS1 Gene (Entity type)	MELTF antisense RNA 1
	MIR3659HG Gene (Entity type)	MIR3659 host gene
	LOC107984243 Gene (Entity type)	uncharacterized LOC107984243
	SNORA28 Gene (Entity type)	small nucleolar RNA, H/ACA box 28
	LINC01618 Gene (Entity type)	long intergenic non-protein coding RNA 1618
	PMS2P14 Gene (Entity type)	PMS1 homolog 2, mismatch repair system component pseudogene 14

SNHG8

Gene (Entity type)

small nucleolar RNA host gene 8

AFAP1-AS1

Gene (Entity type)

AFAP1 antisense RNA 1

ZNF232-AS1

Gene (Entity type)

ZNF232 antisense RNA 1

LINC02982

Gene (Entity type)

long intergenic non-protein coding RNA 2982

MELTF-AS1

Gene (Entity type)

MELTF antisense RNA 1

MIR3659HG

Gene (Entity type)

MIR3659 host gene

LOC107984243

Gene (Entity type)

uncharacterized LOC107984243

SNORA28

Gene (Entity type)

small nucleolar RNA, H/ACA box 28

LINC01618

Gene (Entity type)

long intergenic non-protein coding RNA 1618

PMS2P14

Gene (Entity type)

PMS1 homolog 2, mismatch repair system component pseudogene 14

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.