GSE163884 SUMO2 SUMO1 knockout U2OS 1 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE163884_SUMO2_SUMO1 knockout_U2OS_1_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE163884_SUMO2_SUMO1 knockout_U2OS_1_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE163884_SUMO2_SUMO1 knockout_U2OS_1_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE163884_SUMO2_SUMO1 knockout_U2OS_1_v_0_human_dn.

Results found

Linked to

	Label	Description
	SNHG16 Gene (Entity type)	small nucleolar RNA host gene 16
	POU3F3 Gene (Entity type)	POU class 3 homeobox 3
	LINC00665 Gene (Entity type)	long intergenic non-protein coding RNA 665
	LINC00662 Gene (Entity type)	long intergenic non-protein coding RNA 662
	MIAT Gene (Entity type)	myocardial infarction associated transcript
	LINC00294 Gene (Entity type)	long intergenic non-protein coding RNA 294
	LINC00958 Gene (Entity type)	long intergenic non-protein coding RNA 958
	APCDD1L-DT Gene (Entity type)	APCDD1L divergent transcript
	CCDC92B Gene (Entity type)	coiled-coil domain containing 92B
	LINC03104 Gene (Entity type)	long intergenic non-protein coding RNA 3104

SNHG16

Gene (Entity type)

small nucleolar RNA host gene 16

POU3F3

Gene (Entity type)

POU class 3 homeobox 3

LINC00665

Gene (Entity type)

long intergenic non-protein coding RNA 665

LINC00662

Gene (Entity type)

long intergenic non-protein coding RNA 662

MIAT

Gene (Entity type)

myocardial infarction associated transcript

LINC00294

Gene (Entity type)

long intergenic non-protein coding RNA 294

LINC00958

Gene (Entity type)

long intergenic non-protein coding RNA 958

APCDD1L-DT

Gene (Entity type)

APCDD1L divergent transcript

CCDC92B

Gene (Entity type)

coiled-coil domain containing 92B

LINC03104

Gene (Entity type)

long intergenic non-protein coding RNA 3104

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.