GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 0 v 4 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_0_v_4_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_0_v_4_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_0_v_4_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_0_v_4_human_up.

Results found

Linked to

	Label	Description
	HOXA11-AS Gene (Entity type)	ENSG00000240990 - HOXA11 antisense RNA
	CD99P1 Gene (Entity type)	ENSG00000292362 - CD99 molecule pseudogene 1
	CD99P1 Gene (Entity type)	ENSG00000291040 - CD99 molecule pseudogene 1
	NALT1 Gene (Entity type)	ENSG00000237886 - NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1
	LINC02899 Gene (Entity type)	ENSG00000248874 - long intergenic non-protein coding RNA 2899
	SDHAP2 Gene (Entity type)	ENSG00000242086 - SDHA pseudogene 2
	LOC105376381 Gene (Entity type)	ENSG00000287235 - uncharacterized LOC105376381
	LOC100287430 Gene (Entity type)	ENSG00000233558 - ribosomal protein S5 pseudogene
	AGAP1-IT1 Gene (Entity type)	ENSG00000235529 - AGAP1 intronic transcript 1
	RPL7AP22 Gene (Entity type)	ENSG00000227331 - ribosomal protein L7a pseudogene 22

HOXA11-AS

Gene (Entity type)

ENSG00000240990 - HOXA11 antisense RNA

CD99P1

Gene (Entity type)

ENSG00000292362 - CD99 molecule pseudogene 1

CD99P1

Gene (Entity type)

ENSG00000291040 - CD99 molecule pseudogene 1

NALT1

Gene (Entity type)

ENSG00000237886 - NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1

LINC02899

Gene (Entity type)

ENSG00000248874 - long intergenic non-protein coding RNA 2899

SDHAP2

Gene (Entity type)

ENSG00000242086 - SDHA pseudogene 2

LOC105376381

Gene (Entity type)

ENSG00000287235 - uncharacterized LOC105376381

LOC100287430

Gene (Entity type)

ENSG00000233558 - ribosomal protein S5 pseudogene

AGAP1-IT1

Gene (Entity type)

ENSG00000235529 - AGAP1 intronic transcript 1

RPL7AP22

Gene (Entity type)

ENSG00000227331 - ribosomal protein L7a pseudogene 22

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.