GSAP Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSAP Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSAP Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSAP Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSAP Up.

Results found

Linked to

	Label	Description
	SLC35A3 Gene (Entity type)	ENSG00000117620 - solute carrier family 35 member A3
	B4GALT4 Gene (Entity type)	ENSG00000121578 - beta-1,4-galactosyltransferase 4
	CDK17 Gene (Entity type)	ENSG00000059758 - cyclin dependent kinase 17
	CLIP1 Gene (Entity type)	ENSG00000130779 - CAP-Gly domain containing linker protein 1
	CCDC88C Gene (Entity type)	ENSG00000015133 - coiled-coil and HOOK domain protein 88C
	GADD45G Gene (Entity type)	ENSG00000130222 - growth arrest and DNA damage inducible gamma
	BCL10 Gene (Entity type)	ENSG00000142867 - BCL10 immune signaling adaptor
	RPL35A Gene (Entity type)	ENSG00000182899 - ribosomal protein L35a
	MED6 Gene (Entity type)	ENSG00000133997 - mediator complex subunit 6
	PEX3 Gene (Entity type)	ENSG00000034693 - peroxisomal biogenesis factor 3

SLC35A3

Gene (Entity type)

ENSG00000117620 - solute carrier family 35 member A3

B4GALT4

Gene (Entity type)

ENSG00000121578 - beta-1,4-galactosyltransferase 4

CDK17

Gene (Entity type)

ENSG00000059758 - cyclin dependent kinase 17

CLIP1

Gene (Entity type)

ENSG00000130779 - CAP-Gly domain containing linker protein 1

CCDC88C

Gene (Entity type)

ENSG00000015133 - coiled-coil and HOOK domain protein 88C

GADD45G

Gene (Entity type)

ENSG00000130222 - growth arrest and DNA damage inducible gamma

BCL10

Gene (Entity type)

ENSG00000142867 - BCL10 immune signaling adaptor

RPL35A

Gene (Entity type)

ENSG00000182899 - ribosomal protein L35a

MED6

Gene (Entity type)

ENSG00000133997 - mediator complex subunit 6

PEX3

Gene (Entity type)

ENSG00000034693 - peroxisomal biogenesis factor 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.