ORC4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ORC4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ORC4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ORC4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ORC4 Up.

Results found

Linked to

	Label	Description
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	SLIRP Gene (Entity type)	ENSG00000119705 - SRA stem-loop interacting RNA binding protein
	MEX3C Gene (Entity type)	ENSG00000176624 - mex-3 RNA binding family member C
	PPID Gene (Entity type)	ENSG00000171497 - peptidylprolyl isomerase D
	RAB23 Gene (Entity type)	ENSG00000112210 - RAB23, member RAS oncogene family
	CCL13 Gene (Entity type)	ENSG00000181374 - C-C motif chemokine ligand 13
	SDHAF3 Gene (Entity type)	ENSG00000196636 - succinate dehydrogenase complex assembly factor 3
	CSPG5 Gene (Entity type)	ENSG00000114646 - chondroitin sulfate proteoglycan 5

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

SLIRP

Gene (Entity type)

ENSG00000119705 - SRA stem-loop interacting RNA binding protein

MEX3C

Gene (Entity type)

ENSG00000176624 - mex-3 RNA binding family member C

PPID

Gene (Entity type)

ENSG00000171497 - peptidylprolyl isomerase D

RAB23

Gene (Entity type)

ENSG00000112210 - RAB23, member RAS oncogene family

CCL13

Gene (Entity type)

ENSG00000181374 - C-C motif chemokine ligand 13

SDHAF3

Gene (Entity type)

ENSG00000196636 - succinate dehydrogenase complex assembly factor 3

CSPG5

Gene (Entity type)

ENSG00000114646 - chondroitin sulfate proteoglycan 5

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.