GSE203329 HCC knockout 2 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE203329_HCC knockout_2_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE203329_HCC knockout_2_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE203329_HCC knockout_2_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE203329_HCC knockout_2_v_1_human_up.

Results found

Linked to

	Label	Description
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	PLCG1 Gene (Entity type)	ENSG00000124181 - phospholipase C gamma 1
	ULK1 Gene (Entity type)	ENSG00000177169 - unc-51 like autophagy activating kinase 1
	TLE3 Gene (Entity type)	ENSG00000140332 - TLE family member 3, transcriptional corepressor
	SEC16A Gene (Entity type)	ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor
	KDM6B Gene (Entity type)	ENSG00000132510 - lysine demethylase 6B
	NFIC Gene (Entity type)	ENSG00000141905 - nuclear factor I C
	SLC6A9 Gene (Entity type)	ENSG00000196517 - solute carrier family 6 member 9
	TRERF1 Gene (Entity type)	ENSG00000124496 - transcriptional regulating factor 1
	CAD Gene (Entity type)	ENSG00000084774 - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

PLCG1

Gene (Entity type)

ENSG00000124181 - phospholipase C gamma 1

ULK1

Gene (Entity type)

ENSG00000177169 - unc-51 like autophagy activating kinase 1

TLE3

Gene (Entity type)

ENSG00000140332 - TLE family member 3, transcriptional corepressor

SEC16A

Gene (Entity type)

ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor

KDM6B

Gene (Entity type)

ENSG00000132510 - lysine demethylase 6B

NFIC

Gene (Entity type)

ENSG00000141905 - nuclear factor I C

SLC6A9

Gene (Entity type)

ENSG00000196517 - solute carrier family 6 member 9

TRERF1

Gene (Entity type)

ENSG00000124496 - transcriptional regulating factor 1

CAD

Gene (Entity type)

ENSG00000084774 - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.