EBI3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with EBI3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with EBI3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with EBI3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with EBI3 Up.

Results found

Linked to

	Label	Description
	MRPL17 Gene (Entity type)	ENSG00000158042 - mitochondrial ribosomal protein L17
	TRAK2 Gene (Entity type)	ENSG00000115993 - trafficking kinesin protein 2
	STN1 Gene (Entity type)	ENSG00000107960 - STN1 subunit of CST complex
	CA14 Gene (Entity type)	ENSG00000118298 - carbonic anhydrase 14
	EIF3I Gene (Entity type)	ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I
	RAB8B Gene (Entity type)	ENSG00000166128 - RAB8B, member RAS oncogene family
	TMEM140 Gene (Entity type)	ENSG00000146859 - transmembrane protein 140
	UBE2NL Gene (Entity type)	ENSG00000276380 - ubiquitin conjugating enzyme E2 N like (gene/pseudogene)
	GATC Gene (Entity type)	ENSG00000257218 - glutamyl-tRNA amidotransferase subunit C
	DPH5 Gene (Entity type)	ENSG00000117543 - diphthamide biosynthesis 5

MRPL17

Gene (Entity type)

ENSG00000158042 - mitochondrial ribosomal protein L17

TRAK2

Gene (Entity type)

ENSG00000115993 - trafficking kinesin protein 2

STN1

Gene (Entity type)

ENSG00000107960 - STN1 subunit of CST complex

CA14

Gene (Entity type)

ENSG00000118298 - carbonic anhydrase 14

EIF3I

Gene (Entity type)

ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I

RAB8B

Gene (Entity type)

ENSG00000166128 - RAB8B, member RAS oncogene family

TMEM140

Gene (Entity type)

ENSG00000146859 - transmembrane protein 140

UBE2NL

Gene (Entity type)

ENSG00000276380 - ubiquitin conjugating enzyme E2 N like (gene/pseudogene)

GATC

Gene (Entity type)

ENSG00000257218 - glutamyl-tRNA amidotransferase subunit C

DPH5

Gene (Entity type)

ENSG00000117543 - diphthamide biosynthesis 5

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.