VCAN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with VCAN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with VCAN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with VCAN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with VCAN Up.

Results found

Linked to

	Label	Description
	RAB23 Gene (Entity type)	ENSG00000112210 - RAB23, member RAS oncogene family
	CDC42BPA Gene (Entity type)	ENSG00000143776 - CDC42 binding protein kinase alpha
	SIM2 Gene (Entity type)	ENSG00000159263 - SIM bHLH transcription factor 2
	ITGB7 Gene (Entity type)	ENSG00000139626 - integrin subunit beta 7
	RPRD2 Gene (Entity type)	ENSG00000163125 - regulation of nuclear pre-mRNA domain containing 2
	MAST3 Gene (Entity type)	ENSG00000099308 - microtubule associated serine/threonine kinase 3
	THOC7 Gene (Entity type)	ENSG00000163634 - THO complex subunit 7
	ZNF692 Gene (Entity type)	ENSG00000171163 - zinc finger protein 692
	SUGP2 Gene (Entity type)	ENSG00000064607 - SURP and G-patch domain containing 2
	SGSM2 Gene (Entity type)	ENSG00000141258 - small G protein signaling modulator 2

RAB23

Gene (Entity type)

ENSG00000112210 - RAB23, member RAS oncogene family

CDC42BPA

Gene (Entity type)

ENSG00000143776 - CDC42 binding protein kinase alpha

SIM2

Gene (Entity type)

ENSG00000159263 - SIM bHLH transcription factor 2

ITGB7

Gene (Entity type)

ENSG00000139626 - integrin subunit beta 7

RPRD2

Gene (Entity type)

ENSG00000163125 - regulation of nuclear pre-mRNA domain containing 2

MAST3

Gene (Entity type)

ENSG00000099308 - microtubule associated serine/threonine kinase 3

THOC7

Gene (Entity type)

ENSG00000163634 - THO complex subunit 7

ZNF692

Gene (Entity type)

ENSG00000171163 - zinc finger protein 692

SUGP2

Gene (Entity type)

ENSG00000064607 - SURP and G-patch domain containing 2

SGSM2

Gene (Entity type)

ENSG00000141258 - small G protein signaling modulator 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.