LIMA1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with LIMA1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with LIMA1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with LIMA1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with LIMA1 Up.

Results found

Linked to

	Label	Description
	EIF4E Gene (Entity type)	ENSG00000151247 - eukaryotic translation initiation factor 4E
	RPA1 Gene (Entity type)	ENSG00000132383 - replication protein A1
	MDC1 Gene (Entity type)	ENSG00000137337 - mediator of DNA damage checkpoint 1
	VEZF1 Gene (Entity type)	ENSG00000136451 - vascular endothelial zinc finger 1
	ADAMTS3 Gene (Entity type)	ENSG00000156140 - ADAM metallopeptidase with thrombospondin type 1 motif 3
	KHK Gene (Entity type)	ENSG00000138030 - ketohexokinase
	SOX12 Gene (Entity type)	ENSG00000177732 - SRY-box transcription factor 12
	SNRPA Gene (Entity type)	ENSG00000077312 - small nuclear ribonucleoprotein polypeptide A
	ZNF329 Gene (Entity type)	ENSG00000181894 - zinc finger protein 329
	PRRC2A Gene (Entity type)	ENSG00000204469 - proline rich coiled-coil 2A

EIF4E

Gene (Entity type)

ENSG00000151247 - eukaryotic translation initiation factor 4E

RPA1

Gene (Entity type)

ENSG00000132383 - replication protein A1

MDC1

Gene (Entity type)

ENSG00000137337 - mediator of DNA damage checkpoint 1

VEZF1

Gene (Entity type)

ENSG00000136451 - vascular endothelial zinc finger 1

ADAMTS3

Gene (Entity type)

ENSG00000156140 - ADAM metallopeptidase with thrombospondin type 1 motif 3

KHK

Gene (Entity type)

ENSG00000138030 - ketohexokinase

SOX12

Gene (Entity type)

ENSG00000177732 - SRY-box transcription factor 12

SNRPA

Gene (Entity type)

ENSG00000077312 - small nuclear ribonucleoprotein polypeptide A

ZNF329

Gene (Entity type)

ENSG00000181894 - zinc finger protein 329

PRRC2A

Gene (Entity type)

ENSG00000204469 - proline rich coiled-coil 2A

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.