GSE153158 NF-kB knockout U-937 1 v 3 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE153158_NF-kB knockout_U-937_1_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE153158_NF-kB knockout_U-937_1_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE153158_NF-kB knockout_U-937_1_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE153158_NF-kB knockout_U-937_1_v_3_human_up.

Results found

Linked to

	Label	Description
	MANCR Gene (Entity type)	ENSG00000231298 - mitotically associated long non coding RNA
	ALOX12P2 Gene (Entity type)	ENSG00000291084 - arachidonate 12-lipoxygenase pseudogene 2
	LINC02908 Gene (Entity type)	ENSG00000180539 - long intergenic non-protein coding RNA 2908
	ANKRD42-DT Gene (Entity type)	ENSG00000247137 - ANKRD42 divergent transcript
	SMAD5-AS1 Gene (Entity type)	ENSG00000164621 - SMAD5 antisense RNA 1
	LINC02266 Gene (Entity type)	ENSG00000272727 - long intergenic non-protein coding RNA 2266
	SUGT1P1 Gene (Entity type)	ENSG00000228072 - SUGT1 pseudogene 1
	FAM87A Gene (Entity type)	ENSG00000182366 - family with sequence similarity 87 member A
	RPL12P25 Gene (Entity type)	ENSG00000293144 - ribosomal protein L12 pseudogene 25
	LOC124901048 Gene (Entity type)	ENSG00000248709 - uncharacterized LOC124901048

MANCR

Gene (Entity type)

ENSG00000231298 - mitotically associated long non coding RNA

ALOX12P2

Gene (Entity type)

ENSG00000291084 - arachidonate 12-lipoxygenase pseudogene 2

LINC02908

Gene (Entity type)

ENSG00000180539 - long intergenic non-protein coding RNA 2908

ANKRD42-DT

Gene (Entity type)

ENSG00000247137 - ANKRD42 divergent transcript

SMAD5-AS1

Gene (Entity type)

ENSG00000164621 - SMAD5 antisense RNA 1

LINC02266

Gene (Entity type)

ENSG00000272727 - long intergenic non-protein coding RNA 2266

SUGT1P1

Gene (Entity type)

ENSG00000228072 - SUGT1 pseudogene 1

FAM87A

Gene (Entity type)

ENSG00000182366 - family with sequence similarity 87 member A

RPL12P25

Gene (Entity type)

ENSG00000293144 - ribosomal protein L12 pseudogene 25

LOC124901048

Gene (Entity type)

ENSG00000248709 - uncharacterized LOC124901048

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.