CALM3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CALM3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CALM3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CALM3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CALM3 Up.

Results found

Linked to

	Label	Description
	SLC35A3 Gene (Entity type)	ENSG00000117620 - solute carrier family 35 member A3
	ARPC1A Gene (Entity type)	ENSG00000241685 - actin related protein 2/3 complex subunit 1A
	SLC22A3 Gene (Entity type)	ENSG00000146477 - solute carrier family 22 member 3
	RGS17 Gene (Entity type)	ENSG00000091844 - regulator of G protein signaling 17
	FOXA2 Gene (Entity type)	ENSG00000125798 - forkhead box A2
	MAD1L1 Gene (Entity type)	ENSG00000002822 - mitotic arrest deficient 1 like 1
	ASXL1 Gene (Entity type)	ENSG00000171456 - ASXL transcriptional regulator 1
	NDUFV1 Gene (Entity type)	ENSG00000167792 - NADH:ubiquinone oxidoreductase core subunit V1
	YIF1A Gene (Entity type)	ENSG00000174851 - Yip1 interacting factor homolog A, membrane trafficking protein
	CFAP298 Gene (Entity type)	ENSG00000159079 - cilia and flagella associated protein 298

SLC35A3

Gene (Entity type)

ENSG00000117620 - solute carrier family 35 member A3

ARPC1A

Gene (Entity type)

ENSG00000241685 - actin related protein 2/3 complex subunit 1A

SLC22A3

Gene (Entity type)

ENSG00000146477 - solute carrier family 22 member 3

RGS17

Gene (Entity type)

ENSG00000091844 - regulator of G protein signaling 17

FOXA2

Gene (Entity type)

ENSG00000125798 - forkhead box A2

MAD1L1

Gene (Entity type)

ENSG00000002822 - mitotic arrest deficient 1 like 1

ASXL1

Gene (Entity type)

ENSG00000171456 - ASXL transcriptional regulator 1

NDUFV1

Gene (Entity type)

ENSG00000167792 - NADH:ubiquinone oxidoreductase core subunit V1

YIF1A

Gene (Entity type)

ENSG00000174851 - Yip1 interacting factor homolog A, membrane trafficking protein

CFAP298

Gene (Entity type)

ENSG00000159079 - cilia and flagella associated protein 298

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.