MMP13 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MMP13 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MMP13 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MMP13 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MMP13 Up.

Results found

Linked to

	Label	Description
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	USO1 Gene (Entity type)	ENSG00000138768 - USO1 vesicle transport factor
	GNB2 Gene (Entity type)	ENSG00000172354 - G protein subunit beta 2
	DVL3 Gene (Entity type)	ENSG00000161202 - dishevelled segment polarity protein 3
	UPF3B Gene (Entity type)	ENSG00000125351 - UPF3B regulator of nonsense mediated mRNA decay
	SOX15 Gene (Entity type)	ENSG00000129194 - SRY-box transcription factor 15
	INTS3 Gene (Entity type)	ENSG00000143624 - integrator complex subunit 3
	BAZ2A Gene (Entity type)	ENSG00000076108 - bromodomain adjacent to zinc finger domain 2A
	PAPOLA Gene (Entity type)	ENSG00000090060 - poly(A) polymerase alpha
	GPRASP1 Gene (Entity type)	ENSG00000198932 - G protein-coupled receptor associated sorting protein 1

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

USO1

Gene (Entity type)

ENSG00000138768 - USO1 vesicle transport factor

GNB2

Gene (Entity type)

ENSG00000172354 - G protein subunit beta 2

DVL3

Gene (Entity type)

ENSG00000161202 - dishevelled segment polarity protein 3

UPF3B

Gene (Entity type)

ENSG00000125351 - UPF3B regulator of nonsense mediated mRNA decay

SOX15

Gene (Entity type)

ENSG00000129194 - SRY-box transcription factor 15

INTS3

Gene (Entity type)

ENSG00000143624 - integrator complex subunit 3

BAZ2A

Gene (Entity type)

ENSG00000076108 - bromodomain adjacent to zinc finger domain 2A

PAPOLA

Gene (Entity type)

ENSG00000090060 - poly(A) polymerase alpha

GPRASP1

Gene (Entity type)

ENSG00000198932 - G protein-coupled receptor associated sorting protein 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.