GSE120229 PCIF1 knockdown 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE120229_PCIF1 knockdown_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE120229_PCIF1 knockdown_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE120229_PCIF1 knockdown_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE120229_PCIF1 knockdown_0_v_1_human_up.

Results found

Linked to

	Label	Description
	CYP2B7P Gene (Entity type)	ENSG00000291083 - cytochrome P450 family 2 subfamily B member 7, pseudogene
	PVT1 Gene (Entity type)	ENSG00000249859 - Pvt1 oncogene
	TP53TG1 Gene (Entity type)	ENSG00000182165 - TP53 target 1
	LINC00649 Gene (Entity type)	ENSG00000237945 - long intergenic non-protein coding RNA 649
	CD27-AS1 Gene (Entity type)	ENSG00000215039 - CD27 antisense RNA 1
	FMC1-LUC7L2 Gene (Entity type)	ENSG00000269955 - FMC1-LUC7L2 readthrough
	OSER1-DT Gene (Entity type)	ENSG00000223891 - OSER1 divergent transcript
	LINC01116 Gene (Entity type)	ENSG00000163364 - long intergenic non-protein coding RNA 1116
	ALDH1A3-AS1 Gene (Entity type)	ENSG00000259583 - ALDH1A3 antisense RNA 1
	LINC00958 Gene (Entity type)	ENSG00000251381 - long intergenic non-protein coding RNA 958

CYP2B7P

Gene (Entity type)

ENSG00000291083 - cytochrome P450 family 2 subfamily B member 7, pseudogene

PVT1

Gene (Entity type)

ENSG00000249859 - Pvt1 oncogene

TP53TG1

Gene (Entity type)

ENSG00000182165 - TP53 target 1

LINC00649

Gene (Entity type)

ENSG00000237945 - long intergenic non-protein coding RNA 649

CD27-AS1

Gene (Entity type)

ENSG00000215039 - CD27 antisense RNA 1

FMC1-LUC7L2

Gene (Entity type)

ENSG00000269955 - FMC1-LUC7L2 readthrough

OSER1-DT

Gene (Entity type)

ENSG00000223891 - OSER1 divergent transcript

LINC01116

Gene (Entity type)

ENSG00000163364 - long intergenic non-protein coding RNA 1116

ALDH1A3-AS1

Gene (Entity type)

ENSG00000259583 - ALDH1A3 antisense RNA 1

LINC00958

Gene (Entity type)

ENSG00000251381 - long intergenic non-protein coding RNA 958

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.