PIKFYVE Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PIKFYVE Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PIKFYVE Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PIKFYVE Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PIKFYVE Up.

Results found

Linked to

	Label	Description
	YEATS4 Gene (Entity type)	ENSG00000127337 - YEATS domain containing 4
	PGM3 Gene (Entity type)	ENSG00000013375 - phosphoglucomutase 3
	CRTC3 Gene (Entity type)	ENSG00000140577 - CREB regulated transcription coactivator 3
	FANCL Gene (Entity type)	ENSG00000115392 - FA complementation group L
	PAXBP1 Gene (Entity type)	ENSG00000159086 - PAX3 and PAX7 binding protein 1
	SMCHD1 Gene (Entity type)	ENSG00000101596 - structural maintenance of chromosomes flexible hinge domain containing 1
	NECAP1 Gene (Entity type)	ENSG00000089818 - NECAP endocytosis associated 1
	FBXO3 Gene (Entity type)	ENSG00000110429 - F-box protein 3
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	SACM1L Gene (Entity type)	ENSG00000211456 - SAC1 like phosphatidylinositide phosphatase

YEATS4

Gene (Entity type)

ENSG00000127337 - YEATS domain containing 4

PGM3

Gene (Entity type)

ENSG00000013375 - phosphoglucomutase 3

CRTC3

Gene (Entity type)

ENSG00000140577 - CREB regulated transcription coactivator 3

FANCL

Gene (Entity type)

ENSG00000115392 - FA complementation group L

PAXBP1

Gene (Entity type)

ENSG00000159086 - PAX3 and PAX7 binding protein 1

SMCHD1

Gene (Entity type)

ENSG00000101596 - structural maintenance of chromosomes flexible hinge domain containing 1

NECAP1

Gene (Entity type)

ENSG00000089818 - NECAP endocytosis associated 1

FBXO3

Gene (Entity type)

ENSG00000110429 - F-box protein 3

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

SACM1L

Gene (Entity type)

ENSG00000211456 - SAC1 like phosphatidylinositide phosphatase

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.