ALCAM Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ALCAM Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ALCAM Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ALCAM Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ALCAM Up.

Results found

Linked to

	Label	Description
	NME3 Gene (Entity type)	ENSG00000103024 - NME/NM23 nucleoside diphosphate kinase 3
	BSCL2 Gene (Entity type)	ENSG00000168000 - BSCL2 lipid droplet biogenesis associated, seipin
	TSPAN9 Gene (Entity type)	ENSG00000011105 - tetraspanin 9
	HPN Gene (Entity type)	ENSG00000105707 - hepsin
	PRP4K Gene (Entity type)	ENSG00000112739 - pre-mRNA processing factor kinase PRP4K
	SP3 Gene (Entity type)	ENSG00000172845 - Sp3 transcription factor
	CR2 Gene (Entity type)	ENSG00000117322 - complement C3d receptor 2
	SEMA4A Gene (Entity type)	ENSG00000196189 - semaphorin 4A
	STAG3 Gene (Entity type)	ENSG00000066923 - STAG3 cohesin complex component
	EDRF1 Gene (Entity type)	ENSG00000107938 - erythroid differentiation regulatory factor 1

NME3

Gene (Entity type)

ENSG00000103024 - NME/NM23 nucleoside diphosphate kinase 3

BSCL2

Gene (Entity type)

ENSG00000168000 - BSCL2 lipid droplet biogenesis associated, seipin

TSPAN9

Gene (Entity type)

ENSG00000011105 - tetraspanin 9

HPN

Gene (Entity type)

ENSG00000105707 - hepsin

PRP4K

Gene (Entity type)

ENSG00000112739 - pre-mRNA processing factor kinase PRP4K

SP3

Gene (Entity type)

ENSG00000172845 - Sp3 transcription factor

CR2

Gene (Entity type)

ENSG00000117322 - complement C3d receptor 2

SEMA4A

Gene (Entity type)

ENSG00000196189 - semaphorin 4A

STAG3

Gene (Entity type)

ENSG00000066923 - STAG3 cohesin complex component

EDRF1

Gene (Entity type)

ENSG00000107938 - erythroid differentiation regulatory factor 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.