CCDC50 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CCDC50 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CCDC50 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CCDC50 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CCDC50 Up.

Results found

Linked to

	Label	Description
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	CHMP2A Gene (Entity type)	ENSG00000130724 - charged multivesicular body protein 2A
	ATP5F1D Gene (Entity type)	ENSG00000099624 - ATP synthase F1 subunit delta
	NDUFA3 Gene (Entity type)	ENSG00000170906 - NADH:ubiquinone oxidoreductase subunit A3
	UPF3A Gene (Entity type)	ENSG00000169062 - UPF3A regulator of nonsense mediated mRNA decay
	AFG3L2 Gene (Entity type)	ENSG00000141385 - AFG3 like matrix AAA peptidase subunit 2
	ATP5MF Gene (Entity type)	ENSG00000241468 - ATP synthase membrane subunit f
	PRRC2A Gene (Entity type)	ENSG00000204469 - proline rich coiled-coil 2A
	CES3 Gene (Entity type)	ENSG00000172828 - carboxylesterase 3
	SLC22A17 Gene (Entity type)	ENSG00000092096 - solute carrier family 22 member 17

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

CHMP2A

Gene (Entity type)

ENSG00000130724 - charged multivesicular body protein 2A

ATP5F1D

Gene (Entity type)

ENSG00000099624 - ATP synthase F1 subunit delta

NDUFA3

Gene (Entity type)

ENSG00000170906 - NADH:ubiquinone oxidoreductase subunit A3

UPF3A

Gene (Entity type)

ENSG00000169062 - UPF3A regulator of nonsense mediated mRNA decay

AFG3L2

Gene (Entity type)

ENSG00000141385 - AFG3 like matrix AAA peptidase subunit 2

ATP5MF

Gene (Entity type)

ENSG00000241468 - ATP synthase membrane subunit f

PRRC2A

Gene (Entity type)

ENSG00000204469 - proline rich coiled-coil 2A

CES3

Gene (Entity type)

ENSG00000172828 - carboxylesterase 3

SLC22A17

Gene (Entity type)

ENSG00000092096 - solute carrier family 22 member 17

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.