PDPN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PDPN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PDPN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PDPN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PDPN Up.

Results found

Linked to

	Label	Description
	TICAM1 Gene (Entity type)	ENSG00000127666 - TIR domain containing adaptor molecule 1
	PTBP2 Gene (Entity type)	ENSG00000117569 - polypyrimidine tract binding protein 2
	SLIT1 Gene (Entity type)	ENSG00000187122 - slit guidance ligand 1
	RLF Gene (Entity type)	ENSG00000117000 - RLF zinc finger
	CDK13 Gene (Entity type)	ENSG00000065883 - cyclin dependent kinase 13
	CCR5 Gene (Entity type)	ENSG00000160791 - C-C motif chemokine receptor 5
	YY1AP1 Gene (Entity type)	ENSG00000163374 - YY1 associated protein 1
	UBE2Q1 Gene (Entity type)	ENSG00000160714 - ubiquitin conjugating enzyme E2 Q1
	FADD Gene (Entity type)	ENSG00000168040 - Fas associated via death domain
	FKBP2 Gene (Entity type)	ENSG00000173486 - FKBP prolyl isomerase 2

TICAM1

Gene (Entity type)

ENSG00000127666 - TIR domain containing adaptor molecule 1

PTBP2

Gene (Entity type)

ENSG00000117569 - polypyrimidine tract binding protein 2

SLIT1

Gene (Entity type)

ENSG00000187122 - slit guidance ligand 1

RLF

Gene (Entity type)

ENSG00000117000 - RLF zinc finger

CDK13

Gene (Entity type)

ENSG00000065883 - cyclin dependent kinase 13

CCR5

Gene (Entity type)

ENSG00000160791 - C-C motif chemokine receptor 5

YY1AP1

Gene (Entity type)

ENSG00000163374 - YY1 associated protein 1

UBE2Q1

Gene (Entity type)

ENSG00000160714 - ubiquitin conjugating enzyme E2 Q1

FADD

Gene (Entity type)

ENSG00000168040 - Fas associated via death domain

FKBP2

Gene (Entity type)

ENSG00000173486 - FKBP prolyl isomerase 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.