SF3B1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SF3B1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SF3B1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SF3B1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SF3B1 Up.

Results found

Linked to

	Label	Description
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	ATMIN Gene (Entity type)	ENSG00000166454 - ATM interactor
	PPP2CB Gene (Entity type)	ENSG00000104695 - protein phosphatase 2 catalytic subunit beta
	EIF4A2 Gene (Entity type)	ENSG00000156976 - eukaryotic translation initiation factor 4A2
	CACNA1A Gene (Entity type)	ENSG00000141837 - calcium voltage-gated channel subunit alpha1 A
	CREBBP Gene (Entity type)	ENSG00000005339 - CREB binding lysine acetyltransferase
	KLHL2 Gene (Entity type)	ENSG00000109466 - kelch like family member 2
	ELOB Gene (Entity type)	ENSG00000103363 - elongin B
	PATZ1 Gene (Entity type)	ENSG00000100105 - POZ/BTB and AT hook containing zinc finger 1
	EMC3 Gene (Entity type)	ENSG00000125037 - ER membrane protein complex subunit 3

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

ATMIN

Gene (Entity type)

ENSG00000166454 - ATM interactor

PPP2CB

Gene (Entity type)

ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

EIF4A2

Gene (Entity type)

ENSG00000156976 - eukaryotic translation initiation factor 4A2

CACNA1A

Gene (Entity type)

ENSG00000141837 - calcium voltage-gated channel subunit alpha1 A

CREBBP

Gene (Entity type)

ENSG00000005339 - CREB binding lysine acetyltransferase

KLHL2

Gene (Entity type)

ENSG00000109466 - kelch like family member 2

ELOB

Gene (Entity type)

ENSG00000103363 - elongin B

PATZ1

Gene (Entity type)

ENSG00000100105 - POZ/BTB and AT hook containing zinc finger 1

EMC3

Gene (Entity type)

ENSG00000125037 - ER membrane protein complex subunit 3

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.