STX4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with STX4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with STX4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with STX4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with STX4 Up.

Results found

Linked to

	Label	Description
	USP9X Gene (Entity type)	ENSG00000124486 - ubiquitin specific peptidase 9 X-linked
	USP36 Gene (Entity type)	ENSG00000055483 - ubiquitin specific peptidase 36
	PHC2 Gene (Entity type)	ENSG00000134686 - polyhomeotic homolog 2
	RSRC2 Gene (Entity type)	ENSG00000111011 - arginine and serine rich coiled-coil 2
	KLC1 Gene (Entity type)	ENSG00000126214 - kinesin light chain 1
	HAUS3 Gene (Entity type)	ENSG00000214367 - HAUS augmin like complex subunit 3
	ZNF638 Gene (Entity type)	ENSG00000075292 - zinc finger protein 638
	SCAF11 Gene (Entity type)	ENSG00000139218 - SR-related CTD associated factor 11
	TPP2 Gene (Entity type)	ENSG00000134900 - tripeptidyl peptidase 2
	DCAF16 Gene (Entity type)	ENSG00000163257 - DDB1 and CUL4 associated factor 16

USP9X

Gene (Entity type)

ENSG00000124486 - ubiquitin specific peptidase 9 X-linked

USP36

Gene (Entity type)

ENSG00000055483 - ubiquitin specific peptidase 36

PHC2

Gene (Entity type)

ENSG00000134686 - polyhomeotic homolog 2

RSRC2

Gene (Entity type)

ENSG00000111011 - arginine and serine rich coiled-coil 2

KLC1

Gene (Entity type)

ENSG00000126214 - kinesin light chain 1

HAUS3

Gene (Entity type)

ENSG00000214367 - HAUS augmin like complex subunit 3

ZNF638

Gene (Entity type)

ENSG00000075292 - zinc finger protein 638

SCAF11

Gene (Entity type)

ENSG00000139218 - SR-related CTD associated factor 11

TPP2

Gene (Entity type)

ENSG00000134900 - tripeptidyl peptidase 2

DCAF16

Gene (Entity type)

ENSG00000163257 - DDB1 and CUL4 associated factor 16

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.