PTGES Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTGES Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTGES Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTGES Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTGES Down.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	PJA1 Gene (Entity type)	ENSG00000181191 - praja ring finger ubiquitin ligase 1
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	CD79B Gene (Entity type)	ENSG00000007312 - CD79b molecule
	ABCC2 Gene (Entity type)	ENSG00000023839 - ATP binding cassette subfamily C member 2
	NOP2 Gene (Entity type)	ENSG00000111641 - NOP2 nucleolar protein
	CLCN7 Gene (Entity type)	ENSG00000103249 - Cl-/H+ antiporter 7
	TM4SF20 Gene (Entity type)	ENSG00000168955 - transmembrane 4 L six family member 20
	LAMB2 Gene (Entity type)	ENSG00000172037 - laminin subunit beta 2
	VTN Gene (Entity type)	ENSG00000109072 - vitronectin

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

PJA1

Gene (Entity type)

ENSG00000181191 - praja ring finger ubiquitin ligase 1

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

CD79B

Gene (Entity type)

ENSG00000007312 - CD79b molecule

ABCC2

Gene (Entity type)

ENSG00000023839 - ATP binding cassette subfamily C member 2

NOP2

Gene (Entity type)

ENSG00000111641 - NOP2 nucleolar protein

CLCN7

Gene (Entity type)

ENSG00000103249 - Cl-/H+ antiporter 7

TM4SF20

Gene (Entity type)

ENSG00000168955 - transmembrane 4 L six family member 20

LAMB2

Gene (Entity type)

ENSG00000172037 - laminin subunit beta 2

VTN

Gene (Entity type)

ENSG00000109072 - vitronectin

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.