DKC1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with DKC1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with DKC1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with DKC1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with DKC1 Up.

Results found

Linked to

	Label	Description
	EFEMP2 Gene (Entity type)	ENSG00000172638 - EGF-like fibulin extracellular matrix protein 2
	ZNF43 Gene (Entity type)	ENSG00000198521 - zinc finger protein 43
	CD37 Gene (Entity type)	ENSG00000104894 - CD37 molecule
	SLC35E3 Gene (Entity type)	ENSG00000175782 - solute carrier family 35 member E3
	DCTN4 Gene (Entity type)	ENSG00000132912 - dynactin subunit 4
	MRPL57 Gene (Entity type)	ENSG00000173141 - mitochondrial ribosomal protein L57
	CSPG5 Gene (Entity type)	ENSG00000114646 - chondroitin sulfate proteoglycan 5
	TRMT112 Gene (Entity type)	ENSG00000173113 - tRNA methyltransferase activator subunit 11-2
	VPREB1 Gene (Entity type)	ENSG00000169575 - V-set pre-B cell surrogate light chain 1
	RNF114 Gene (Entity type)	ENSG00000124226 - ring finger protein 114

EFEMP2

Gene (Entity type)

ENSG00000172638 - EGF-like fibulin extracellular matrix protein 2

ZNF43

Gene (Entity type)

ENSG00000198521 - zinc finger protein 43

CD37

Gene (Entity type)

ENSG00000104894 - CD37 molecule

SLC35E3

Gene (Entity type)

ENSG00000175782 - solute carrier family 35 member E3

DCTN4

Gene (Entity type)

ENSG00000132912 - dynactin subunit 4

MRPL57

Gene (Entity type)

ENSG00000173141 - mitochondrial ribosomal protein L57

CSPG5

Gene (Entity type)

ENSG00000114646 - chondroitin sulfate proteoglycan 5

TRMT112

Gene (Entity type)

ENSG00000173113 - tRNA methyltransferase activator subunit 11-2

VPREB1

Gene (Entity type)

ENSG00000169575 - V-set pre-B cell surrogate light chain 1

RNF114

Gene (Entity type)

ENSG00000124226 - ring finger protein 114

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.