CD9 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CD9 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CD9 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CD9 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CD9 Down.

Results found

Linked to

	Label	Description
	RBM6 Gene (Entity type)	ENSG00000004534 - RNA binding motif protein 6
	RASIP1 Gene (Entity type)	ENSG00000105538 - Ras interacting protein 1
	IMPDH1 Gene (Entity type)	ENSG00000106348 - inosine monophosphate dehydrogenase 1
	LRRC41 Gene (Entity type)	ENSG00000132128 - leucine rich repeat containing 41
	SVEP1 Gene (Entity type)	ENSG00000165124 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
	ARPC5L Gene (Entity type)	ENSG00000136950 - actin related protein 2/3 complex subunit 5 like
	BUD23 Gene (Entity type)	ENSG00000071462 - BUD23 rRNA methyltransferase and ribosome maturation factor
	LAMB2 Gene (Entity type)	ENSG00000172037 - laminin subunit beta 2
	RETREG3 Gene (Entity type)	ENSG00000141699 - reticulophagy regulator family member 3
	SCAF11 Gene (Entity type)	ENSG00000139218 - SR-related CTD associated factor 11

RBM6

Gene (Entity type)

ENSG00000004534 - RNA binding motif protein 6

RASIP1

Gene (Entity type)

ENSG00000105538 - Ras interacting protein 1

IMPDH1

Gene (Entity type)

ENSG00000106348 - inosine monophosphate dehydrogenase 1

LRRC41

Gene (Entity type)

ENSG00000132128 - leucine rich repeat containing 41

SVEP1

Gene (Entity type)

ENSG00000165124 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1

ARPC5L

Gene (Entity type)

ENSG00000136950 - actin related protein 2/3 complex subunit 5 like

BUD23

Gene (Entity type)

ENSG00000071462 - BUD23 rRNA methyltransferase and ribosome maturation factor

LAMB2

Gene (Entity type)

ENSG00000172037 - laminin subunit beta 2

RETREG3

Gene (Entity type)

ENSG00000141699 - reticulophagy regulator family member 3

SCAF11

Gene (Entity type)

ENSG00000139218 - SR-related CTD associated factor 11

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.