TRAT1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TRAT1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TRAT1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TRAT1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TRAT1 Up.

Results found

Linked to

	Label	Description
	POLR2G Gene (Entity type)	ENSG00000168002 - RNA polymerase II subunit G
	MRPL20 Gene (Entity type)	ENSG00000242485 - mitochondrial ribosomal protein L20
	PREP Gene (Entity type)	ENSG00000085377 - prolyl endopeptidase
	NDUFS1 Gene (Entity type)	ENSG00000023228 - NADH:ubiquinone oxidoreductase core subunit S1
	SLC29A2 Gene (Entity type)	ENSG00000174669 - solute carrier family 29 member 2
	SMCHD1 Gene (Entity type)	ENSG00000101596 - structural maintenance of chromosomes flexible hinge domain containing 1
	GNB2 Gene (Entity type)	ENSG00000172354 - G protein subunit beta 2
	NDUFV2 Gene (Entity type)	ENSG00000178127 - NADH:ubiquinone oxidoreductase core subunit V2
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	TMEM168 Gene (Entity type)	ENSG00000146802 - transmembrane protein 168

POLR2G

Gene (Entity type)

ENSG00000168002 - RNA polymerase II subunit G

MRPL20

Gene (Entity type)

ENSG00000242485 - mitochondrial ribosomal protein L20

PREP

Gene (Entity type)

ENSG00000085377 - prolyl endopeptidase

NDUFS1

Gene (Entity type)

ENSG00000023228 - NADH:ubiquinone oxidoreductase core subunit S1

SLC29A2

Gene (Entity type)

ENSG00000174669 - solute carrier family 29 member 2

SMCHD1

Gene (Entity type)

ENSG00000101596 - structural maintenance of chromosomes flexible hinge domain containing 1

GNB2

Gene (Entity type)

ENSG00000172354 - G protein subunit beta 2

NDUFV2

Gene (Entity type)

ENSG00000178127 - NADH:ubiquinone oxidoreductase core subunit V2

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

TMEM168

Gene (Entity type)

ENSG00000146802 - transmembrane protein 168

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.