AXL Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with AXL Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with AXL Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with AXL Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with AXL Up.

Results found

Linked to

	Label	Description
	SIK3 Gene (Entity type)	ENSG00000160584 - SIK family kinase 3
	SLIRP Gene (Entity type)	ENSG00000119705 - SRA stem-loop interacting RNA binding protein
	RAP1GDS1 Gene (Entity type)	ENSG00000138698 - Rap1 GTPase-GDP dissociation stimulator 1
	NGFR Gene (Entity type)	ENSG00000064300 - nerve growth factor receptor
	SMPD1 Gene (Entity type)	ENSG00000166311 - sphingomyelin phosphodiesterase 1
	CTBS Gene (Entity type)	ENSG00000117151 - chitobiase
	GNG5 Gene (Entity type)	ENSG00000174021 - G protein subunit gamma 5
	TPST1 Gene (Entity type)	ENSG00000169902 - tyrosylprotein sulfotransferase 1
	CSRNP2 Gene (Entity type)	ENSG00000110925 - cysteine and serine rich nuclear protein 2
	ZMPSTE24 Gene (Entity type)	ENSG00000084073 - zinc metallopeptidase STE24

SIK3

Gene (Entity type)

ENSG00000160584 - SIK family kinase 3

SLIRP

Gene (Entity type)

ENSG00000119705 - SRA stem-loop interacting RNA binding protein

RAP1GDS1

Gene (Entity type)

ENSG00000138698 - Rap1 GTPase-GDP dissociation stimulator 1

NGFR

Gene (Entity type)

ENSG00000064300 - nerve growth factor receptor

SMPD1

Gene (Entity type)

ENSG00000166311 - sphingomyelin phosphodiesterase 1

CTBS

Gene (Entity type)

ENSG00000117151 - chitobiase

GNG5

Gene (Entity type)

ENSG00000174021 - G protein subunit gamma 5

TPST1

Gene (Entity type)

ENSG00000169902 - tyrosylprotein sulfotransferase 1

CSRNP2

Gene (Entity type)

ENSG00000110925 - cysteine and serine rich nuclear protein 2

ZMPSTE24

Gene (Entity type)

ENSG00000084073 - zinc metallopeptidase STE24

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.