IMP4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with IMP4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with IMP4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with IMP4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with IMP4 Up.

Results found

Linked to

	Label	Description
	ME3 Gene (Entity type)	ENSG00000151376 - malic enzyme 3
	SNX13 Gene (Entity type)	ENSG00000071189 - sorting nexin 13
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	CCDC91 Gene (Entity type)	ENSG00000123106 - coiled-coil domain containing 91
	POLR3E Gene (Entity type)	ENSG00000058600 - RNA polymerase III subunit E
	STN1 Gene (Entity type)	ENSG00000107960 - STN1 subunit of CST complex
	ATP6V0A4 Gene (Entity type)	ENSG00000105929 - ATPase H+ transporting V0 subunit a4
	FTSJ3 Gene (Entity type)	ENSG00000108592 - FtsJ RNA 2'-O-methyltransferase 3
	ZNF804A Gene (Entity type)	ENSG00000170396 - zinc finger protein 804A
	ZNF354A Gene (Entity type)	ENSG00000169131 - zinc finger protein 354A

ME3

Gene (Entity type)

ENSG00000151376 - malic enzyme 3

SNX13

Gene (Entity type)

ENSG00000071189 - sorting nexin 13

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

CCDC91

Gene (Entity type)

ENSG00000123106 - coiled-coil domain containing 91

POLR3E

Gene (Entity type)

ENSG00000058600 - RNA polymerase III subunit E

STN1

Gene (Entity type)

ENSG00000107960 - STN1 subunit of CST complex

ATP6V0A4

Gene (Entity type)

ENSG00000105929 - ATPase H+ transporting V0 subunit a4

FTSJ3

Gene (Entity type)

ENSG00000108592 - FtsJ RNA 2'-O-methyltransferase 3

ZNF804A

Gene (Entity type)

ENSG00000170396 - zinc finger protein 804A

ZNF354A

Gene (Entity type)

ENSG00000169131 - zinc finger protein 354A

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.