GSE185872 methotrexate macrophage 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE185872_methotrexate_macrophage_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE185872_methotrexate_macrophage_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE185872_methotrexate_macrophage_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE185872_methotrexate_macrophage_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	H3-3A Gene (Entity type)	H3.3 histone A
	FOXD2-AS1 Gene (Entity type)	FOXD2 adjacent opposite strand RNA 1
	LOC100131289 Gene (Entity type)	uncharacterized LOC100131289
	LINC01638 Gene (Entity type)	long intergenic non-protein coding RNA 1638
	TUBAP13 Gene (Entity type)	tubulin alpha pseudogene 13
	VNN3P Gene (Entity type)	vanin 3, pseudogene
	OXCT2P1 Gene (Entity type)	3-oxoacid CoA-transferase 2 pseudogene 1
	ZNF722 Gene (Entity type)	zinc finger protein 722
	SEPTIN7P11 Gene (Entity type)	septin 7 pseudogene 11
	ARHGEF17-AS1 Gene (Entity type)	ARHGEF17 antisense RNA 1

H3-3A

Gene (Entity type)

H3.3 histone A

FOXD2-AS1

Gene (Entity type)

FOXD2 adjacent opposite strand RNA 1

LOC100131289

Gene (Entity type)

uncharacterized LOC100131289

LINC01638

Gene (Entity type)

long intergenic non-protein coding RNA 1638

TUBAP13

Gene (Entity type)

tubulin alpha pseudogene 13

VNN3P

Gene (Entity type)

vanin 3, pseudogene

OXCT2P1

Gene (Entity type)

3-oxoacid CoA-transferase 2 pseudogene 1

ZNF722

Gene (Entity type)

zinc finger protein 722

SEPTIN7P11

Gene (Entity type)

septin 7 pseudogene 11

ARHGEF17-AS1

Gene (Entity type)

ARHGEF17 antisense RNA 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.