STK39 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with STK39 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with STK39 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with STK39 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with STK39 Up.

Results found

Linked to

	Label	Description
	CMPK1 Gene (Entity type)	ENSG00000162368 - cytidine/uridine monophosphate kinase 1
	COQ2 Gene (Entity type)	ENSG00000173085 - coenzyme Q2, polyprenyltransferase
	MTMR1 Gene (Entity type)	ENSG00000063601 - myotubularin related protein 1
	NSL1 Gene (Entity type)	ENSG00000117697 - NSL1 component of MIS12 kinetochore complex
	KYAT3 Gene (Entity type)	ENSG00000137944 - kynurenine aminotransferase 3
	PLA2G12A Gene (Entity type)	ENSG00000123739 - phospholipase A2 group XIIA
	TNFRSF25 Gene (Entity type)	ENSG00000215788 - TNF receptor superfamily member 25
	POMZP3 Gene (Entity type)	ENSG00000146707 - POM121 and ZP3 fusion
	CSF3R Gene (Entity type)	ENSG00000119535 - colony stimulating factor 3 receptor
	CLEC4A Gene (Entity type)	ENSG00000111729 - C-type lectin domain family 4 member A

CMPK1

Gene (Entity type)

ENSG00000162368 - cytidine/uridine monophosphate kinase 1

COQ2

Gene (Entity type)

ENSG00000173085 - coenzyme Q2, polyprenyltransferase

MTMR1

Gene (Entity type)

ENSG00000063601 - myotubularin related protein 1

NSL1

Gene (Entity type)

ENSG00000117697 - NSL1 component of MIS12 kinetochore complex

KYAT3

Gene (Entity type)

ENSG00000137944 - kynurenine aminotransferase 3

PLA2G12A

Gene (Entity type)

ENSG00000123739 - phospholipase A2 group XIIA

TNFRSF25

Gene (Entity type)

ENSG00000215788 - TNF receptor superfamily member 25

POMZP3

Gene (Entity type)

ENSG00000146707 - POM121 and ZP3 fusion

CSF3R

Gene (Entity type)

ENSG00000119535 - colony stimulating factor 3 receptor

CLEC4A

Gene (Entity type)

ENSG00000111729 - C-type lectin domain family 4 member A

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Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.