SDC4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SDC4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SDC4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SDC4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SDC4 Up.

Results found

Linked to

	Label	Description
	CHMP2A Gene (Entity type)	ENSG00000130724 - charged multivesicular body protein 2A
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	NME3 Gene (Entity type)	ENSG00000103024 - NME/NM23 nucleoside diphosphate kinase 3
	ALG5 Gene (Entity type)	ENSG00000120697 - ALG5 dolichyl-phosphate beta-glucosyltransferase
	FBXO28 Gene (Entity type)	ENSG00000143756 - F-box protein 28
	UQCRB Gene (Entity type)	ENSG00000156467 - ubiquinol-cytochrome c reductase binding protein
	COX17 Gene (Entity type)	ENSG00000138495 - cytochrome c oxidase copper chaperone COX17
	NSL1 Gene (Entity type)	ENSG00000117697 - NSL1 component of MIS12 kinetochore complex
	VPS51 Gene (Entity type)	ENSG00000149823 - VPS51 subunit of GARP complex
	TRHDE Gene (Entity type)	ENSG00000072657 - thyrotropin releasing hormone degrading enzyme

CHMP2A

Gene (Entity type)

ENSG00000130724 - charged multivesicular body protein 2A

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

NME3

Gene (Entity type)

ENSG00000103024 - NME/NM23 nucleoside diphosphate kinase 3

ALG5

Gene (Entity type)

ENSG00000120697 - ALG5 dolichyl-phosphate beta-glucosyltransferase

FBXO28

Gene (Entity type)

ENSG00000143756 - F-box protein 28

UQCRB

Gene (Entity type)

ENSG00000156467 - ubiquinol-cytochrome c reductase binding protein

COX17

Gene (Entity type)

ENSG00000138495 - cytochrome c oxidase copper chaperone COX17

NSL1

Gene (Entity type)

ENSG00000117697 - NSL1 component of MIS12 kinetochore complex

VPS51

Gene (Entity type)

ENSG00000149823 - VPS51 subunit of GARP complex

TRHDE

Gene (Entity type)

ENSG00000072657 - thyrotropin releasing hormone degrading enzyme

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.