GSE213681 ALKBH3 knockdown 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE213681_ALKBH3 knockdown_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE213681_ALKBH3 knockdown_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE213681_ALKBH3 knockdown_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE213681_ALKBH3 knockdown_1_v_0_human_up.

Results found

Linked to

	Label	Description
	EGF Gene (Entity type)	ENSG00000138798 - epidermal growth factor
	EXT2 Gene (Entity type)	ENSG00000151348 - exostosin glycosyltransferase 2
	DTX3L Gene (Entity type)	ENSG00000163840 - deltex E3 ubiquitin ligase 3L
	B4GALT4 Gene (Entity type)	ENSG00000121578 - beta-1,4-galactosyltransferase 4
	CASD1 Gene (Entity type)	ENSG00000127995 - CAS1 domain sialic acid O acetyltransferase 1
	TMEM43 Gene (Entity type)	ENSG00000170876 - transmembrane protein 43
	TMEM140 Gene (Entity type)	ENSG00000146859 - transmembrane protein 140
	SAR1A Gene (Entity type)	ENSG00000079332 - secretion associated Ras related GTPase 1A
	NCEH1 Gene (Entity type)	ENSG00000144959 - neutral cholesterol ester hydrolase 1
	STARD4 Gene (Entity type)	ENSG00000164211 - StAR related lipid transfer domain containing 4

EGF

Gene (Entity type)

ENSG00000138798 - epidermal growth factor

EXT2

Gene (Entity type)

ENSG00000151348 - exostosin glycosyltransferase 2

DTX3L

Gene (Entity type)

ENSG00000163840 - deltex E3 ubiquitin ligase 3L

B4GALT4

Gene (Entity type)

ENSG00000121578 - beta-1,4-galactosyltransferase 4

CASD1

Gene (Entity type)

ENSG00000127995 - CAS1 domain sialic acid O acetyltransferase 1

TMEM43

Gene (Entity type)

ENSG00000170876 - transmembrane protein 43

TMEM140

Gene (Entity type)

ENSG00000146859 - transmembrane protein 140

SAR1A

Gene (Entity type)

ENSG00000079332 - secretion associated Ras related GTPase 1A

NCEH1

Gene (Entity type)

ENSG00000144959 - neutral cholesterol ester hydrolase 1

STARD4

Gene (Entity type)

ENSG00000164211 - StAR related lipid transfer domain containing 4

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.