GSE213681 ALKBH3 knockdown 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE213681_ALKBH3 knockdown_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE213681_ALKBH3 knockdown_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE213681_ALKBH3 knockdown_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE213681_ALKBH3 knockdown_1_v_0_human_up.

Results found

Linked to

	Label	Description
	CHROMR Gene (Entity type)	cholesterol induced regulator of metabolism RNA
	ALDH1A3-AS1 Gene (Entity type)	ALDH1A3 antisense RNA 1
	CNN3-DT Gene (Entity type)	CNN3 divergent transcript
	ERVE-5 Gene (Entity type)	endogenous retrovirus group E member 5
	LINC01833 Gene (Entity type)	long intergenic non-protein coding RNA 1833
	LINC00865 Gene (Entity type)	long intergenic non-protein coding RNA 865
	LINC02154 Gene (Entity type)	long intergenic non-protein coding RNA 2154
	LINC02009 Gene (Entity type)	long intergenic non-protein coding RNA 2009
	LINC01114 Gene (Entity type)	long intergenic non-protein coding RNA 1114
	GBP1P1 Gene (Entity type)	guanylate binding protein 1 pseudogene 1

CHROMR

Gene (Entity type)

cholesterol induced regulator of metabolism RNA

ALDH1A3-AS1

Gene (Entity type)

ALDH1A3 antisense RNA 1

CNN3-DT

Gene (Entity type)

CNN3 divergent transcript

ERVE-5

Gene (Entity type)

endogenous retrovirus group E member 5

LINC01833

Gene (Entity type)

long intergenic non-protein coding RNA 1833

LINC00865

Gene (Entity type)

long intergenic non-protein coding RNA 865

LINC02154

Gene (Entity type)

long intergenic non-protein coding RNA 2154

LINC02009

Gene (Entity type)

long intergenic non-protein coding RNA 2009

LINC01114

Gene (Entity type)

long intergenic non-protein coding RNA 1114

GBP1P1

Gene (Entity type)

guanylate binding protein 1 pseudogene 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.