GSE139540 menadione 3 v 2 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139540_menadione_3_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139540_menadione_3_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139540_menadione_3_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139540_menadione_3_v_2_human_dn.

Results found

Linked to

	Label	Description
	SOX21-AS1 Gene (Entity type)	SOX21 antisense RNA 1
	PTENP1-AS Gene (Entity type)	PTENP1 antisense RNA
	TENM4-AS1 Gene (Entity type)	TENM4 antisense RNA 1
	KAZN-AS1 Gene (Entity type)	KAZN antisense RNA 1
	EIF2AK3-AS1 Gene (Entity type)	EIF2AK3 antisense RNA 1
	LINC01931 Gene (Entity type)	long intergenic non-protein coding RNA 1931
	UBE2Q1-AS1 Gene (Entity type)	UBE2Q1 antisense RNA 1
	ASH2LP3 Gene (Entity type)	ASH2L pseudogene 3
	LINC01533 Gene (Entity type)	long intergenic non-protein coding RNA 1533
	MTCO1P14 Gene (Entity type)	MT-CO1 pseudogene 14

SOX21-AS1

Gene (Entity type)

SOX21 antisense RNA 1

PTENP1-AS

Gene (Entity type)

PTENP1 antisense RNA

TENM4-AS1

Gene (Entity type)

TENM4 antisense RNA 1

KAZN-AS1

Gene (Entity type)

KAZN antisense RNA 1

EIF2AK3-AS1

Gene (Entity type)

EIF2AK3 antisense RNA 1

LINC01931

Gene (Entity type)

long intergenic non-protein coding RNA 1931

UBE2Q1-AS1

Gene (Entity type)

UBE2Q1 antisense RNA 1

ASH2LP3

Gene (Entity type)

ASH2L pseudogene 3

LINC01533

Gene (Entity type)

long intergenic non-protein coding RNA 1533

MTCO1P14

Gene (Entity type)

MT-CO1 pseudogene 14

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.