PPM1G Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PPM1G Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PPM1G Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PPM1G Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PPM1G Up.

Results found

Linked to

	Label	Description
	STN1 Gene (Entity type)	ENSG00000107960 - STN1 subunit of CST complex
	ABHD5 Gene (Entity type)	ENSG00000011198 - abhydrolase domain containing 5, lysophosphatidic acid acyltransferase
	ATP6V0A4 Gene (Entity type)	ENSG00000105929 - ATPase H+ transporting V0 subunit a4
	CFAP20 Gene (Entity type)	ENSG00000070761 - cilia and flagella associated protein 20
	OSBPL2 Gene (Entity type)	ENSG00000130703 - oxysterol binding protein like 2
	UFC1 Gene (Entity type)	ENSG00000143222 - ubiquitin-fold modifier conjugating enzyme 1
	CDK5R1 Gene (Entity type)	ENSG00000176749 - cyclin dependent kinase 5 regulatory subunit 1
	SUGCT Gene (Entity type)	ENSG00000175600 - succinyl-CoA:glutarate-CoA transferase
	PPP6C Gene (Entity type)	ENSG00000119414 - protein phosphatase 6 catalytic subunit
	BRINP3 Gene (Entity type)	ENSG00000162670 - BMP/retinoic acid inducible neural specific 3

STN1

Gene (Entity type)

ENSG00000107960 - STN1 subunit of CST complex

ABHD5

Gene (Entity type)

ENSG00000011198 - abhydrolase domain containing 5, lysophosphatidic acid acyltransferase

ATP6V0A4

Gene (Entity type)

ENSG00000105929 - ATPase H+ transporting V0 subunit a4

CFAP20

Gene (Entity type)

ENSG00000070761 - cilia and flagella associated protein 20

OSBPL2

Gene (Entity type)

ENSG00000130703 - oxysterol binding protein like 2

UFC1

Gene (Entity type)

ENSG00000143222 - ubiquitin-fold modifier conjugating enzyme 1

CDK5R1

Gene (Entity type)

ENSG00000176749 - cyclin dependent kinase 5 regulatory subunit 1

SUGCT

Gene (Entity type)

ENSG00000175600 - succinyl-CoA:glutarate-CoA transferase

PPP6C

Gene (Entity type)

ENSG00000119414 - protein phosphatase 6 catalytic subunit

BRINP3

Gene (Entity type)

ENSG00000162670 - BMP/retinoic acid inducible neural specific 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.