UBC Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with UBC Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with UBC Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with UBC Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with UBC Up.

Results found

Linked to

	Label	Description
	IL11 Gene (Entity type)	ENSG00000095752 - interleukin 11
	PSEN1 Gene (Entity type)	ENSG00000080815 - presenilin 1
	KDM6B Gene (Entity type)	ENSG00000132510 - lysine demethylase 6B
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	TMEM41B Gene (Entity type)	ENSG00000166471 - transmembrane protein 41B
	PPM1B Gene (Entity type)	ENSG00000138032 - protein phosphatase, Mg2+/Mn2+ dependent 1B
	SAR1A Gene (Entity type)	ENSG00000079332 - secretion associated Ras related GTPase 1A
	LRPAP1 Gene (Entity type)	ENSG00000163956 - LDL receptor related protein associated protein 1
	PPME1 Gene (Entity type)	ENSG00000214517 - protein phosphatase methylesterase 1
	BAZ2A Gene (Entity type)	ENSG00000076108 - bromodomain adjacent to zinc finger domain 2A

IL11

Gene (Entity type)

ENSG00000095752 - interleukin 11

PSEN1

Gene (Entity type)

ENSG00000080815 - presenilin 1

KDM6B

Gene (Entity type)

ENSG00000132510 - lysine demethylase 6B

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

TMEM41B

Gene (Entity type)

ENSG00000166471 - transmembrane protein 41B

PPM1B

Gene (Entity type)

ENSG00000138032 - protein phosphatase, Mg2+/Mn2+ dependent 1B

SAR1A

Gene (Entity type)

ENSG00000079332 - secretion associated Ras related GTPase 1A

LRPAP1

Gene (Entity type)

ENSG00000163956 - LDL receptor related protein associated protein 1

PPME1

Gene (Entity type)

ENSG00000214517 - protein phosphatase methylesterase 1

BAZ2A

Gene (Entity type)

ENSG00000076108 - bromodomain adjacent to zinc finger domain 2A

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.