GSE189859 GSE189861 IDH1 knockout 3 v 2 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE189859_GSE189861_IDH1 knockout_3_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE189859_GSE189861_IDH1 knockout_3_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE189859_GSE189861_IDH1 knockout_3_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE189859_GSE189861_IDH1 knockout_3_v_2_human_dn.

Results found

Linked to

	Label	Description
	MIR4435-2HG Gene (Entity type)	MIR4435-2 host gene
	CYTOR Gene (Entity type)	cytoskeleton regulator RNA
	DUXAP8 Gene (Entity type)	double homeobox A pseudogene 8
	DUBR Gene (Entity type)	DPPA2 upstream binding RNA
	ZFHX4-AS1 Gene (Entity type)	ZFHX4 antisense RNA 1
	LNCOG Gene (Entity type)	lncRNA osteogenesis associated
	SEPTIN7P2 Gene (Entity type)	septin 7 pseudogene 2
	RGMB-AS1 Gene (Entity type)	RGMB antisense RNA 1
	LOC102723834 Gene (Entity type)	uncharacterized LOC102723834
	LOC105377378 Gene (Entity type)	uncharacterized LOC105377378

MIR4435-2HG

Gene (Entity type)

MIR4435-2 host gene

CYTOR

Gene (Entity type)

cytoskeleton regulator RNA

DUXAP8

Gene (Entity type)

double homeobox A pseudogene 8

DUBR

Gene (Entity type)

DPPA2 upstream binding RNA

ZFHX4-AS1

Gene (Entity type)

ZFHX4 antisense RNA 1

LNCOG

Gene (Entity type)

lncRNA osteogenesis associated

SEPTIN7P2

Gene (Entity type)

septin 7 pseudogene 2

RGMB-AS1

Gene (Entity type)

RGMB antisense RNA 1

LOC102723834

Gene (Entity type)

uncharacterized LOC102723834

LOC105377378

Gene (Entity type)

uncharacterized LOC105377378

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.