GSE197635 NTN4 overexpression SK-BR-3 1 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE197635_NTN4 overexpression_SK-BR-3_1_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE197635_NTN4 overexpression_SK-BR-3_1_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE197635_NTN4 overexpression_SK-BR-3_1_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE197635_NTN4 overexpression_SK-BR-3_1_v_0_human_dn.

Results found

Linked to

	Label	Description
	UCA1 Gene (Entity type)	urothelial cancer associated 1
	FAM225B Gene (Entity type)	family with sequence similarity 225 member B
	LINC01164 Gene (Entity type)	long intergenic non-protein coding RNA 1164
	DNAAF3-AS1 Gene (Entity type)	DNAAF3 antisense RNA 1
	PRDX6-AS1 Gene (Entity type)	PRDX6 antisense RNA 1
	LINC01929 Gene (Entity type)	long intergenic non-protein coding RNA 1929
	HORMAD2-AS1 Gene (Entity type)	HORMAD2 and MTMR3 antisense RNA 1
	RPL10P6 Gene (Entity type)	ribosomal protein L10 pseudogene 6
	MTCO1P28 Gene (Entity type)	MT-CO1 pseudogene 28
	KIAA1191P2 Gene (Entity type)	KIAA1191 pseudogene 2

UCA1

Gene (Entity type)

urothelial cancer associated 1

FAM225B

Gene (Entity type)

family with sequence similarity 225 member B

LINC01164

Gene (Entity type)

long intergenic non-protein coding RNA 1164

DNAAF3-AS1

Gene (Entity type)

DNAAF3 antisense RNA 1

PRDX6-AS1

Gene (Entity type)

PRDX6 antisense RNA 1

LINC01929

Gene (Entity type)

long intergenic non-protein coding RNA 1929

HORMAD2-AS1

Gene (Entity type)

HORMAD2 and MTMR3 antisense RNA 1

RPL10P6

Gene (Entity type)

ribosomal protein L10 pseudogene 6

MTCO1P28

Gene (Entity type)

MT-CO1 pseudogene 28

KIAA1191P2

Gene (Entity type)

KIAA1191 pseudogene 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.