SKP1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SKP1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SKP1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SKP1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SKP1 Up.

Results found

Linked to

	Label	Description
	BICD2 Gene (Entity type)	ENSG00000185963 - BICD cargo adaptor 2
	STAG3 Gene (Entity type)	ENSG00000066923 - STAG3 cohesin complex component
	IMP4 Gene (Entity type)	ENSG00000136718 - IMP U3 small nucleolar ribonucleoprotein 4
	CBFA2T3 Gene (Entity type)	ENSG00000129993 - CBFA2/RUNX1 partner transcriptional co-repressor 3
	RUFY2 Gene (Entity type)	ENSG00000204130 - RUN and FYVE domain containing 2
	USP15 Gene (Entity type)	ENSG00000135655 - ubiquitin specific peptidase 15
	MOB4 Gene (Entity type)	ENSG00000115540 - MOB family member 4, phocein
	PSG5 Gene (Entity type)	ENSG00000204941 - pregnancy specific beta-1-glycoprotein 5
	ITSN2 Gene (Entity type)	ENSG00000198399 - intersectin 2
	PTPN18 Gene (Entity type)	ENSG00000072135 - protein tyrosine phosphatase non-receptor type 18

BICD2

Gene (Entity type)

ENSG00000185963 - BICD cargo adaptor 2

STAG3

Gene (Entity type)

ENSG00000066923 - STAG3 cohesin complex component

IMP4

Gene (Entity type)

ENSG00000136718 - IMP U3 small nucleolar ribonucleoprotein 4

CBFA2T3

Gene (Entity type)

ENSG00000129993 - CBFA2/RUNX1 partner transcriptional co-repressor 3

RUFY2

Gene (Entity type)

ENSG00000204130 - RUN and FYVE domain containing 2

USP15

Gene (Entity type)

ENSG00000135655 - ubiquitin specific peptidase 15

MOB4

Gene (Entity type)

ENSG00000115540 - MOB family member 4, phocein

PSG5

Gene (Entity type)

ENSG00000204941 - pregnancy specific beta-1-glycoprotein 5

ITSN2

Gene (Entity type)

ENSG00000198399 - intersectin 2

PTPN18

Gene (Entity type)

ENSG00000072135 - protein tyrosine phosphatase non-receptor type 18

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.