PKIB Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PKIB Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PKIB Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PKIB Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PKIB Up.

Results found

Linked to

	Label	Description
	MAP2K3 Gene (Entity type)	ENSG00000034152 - mitogen-activated protein kinase kinase 3
	ASPA Gene (Entity type)	ENSG00000108381 - aspartoacylase
	TMEM140 Gene (Entity type)	ENSG00000146859 - transmembrane protein 140
	SAR1A Gene (Entity type)	ENSG00000079332 - secretion associated Ras related GTPase 1A
	COL17A1 Gene (Entity type)	ENSG00000065618 - collagen type XVII alpha 1 chain
	C1GALT1 Gene (Entity type)	ENSG00000106392 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
	DYNC1I1 Gene (Entity type)	ENSG00000158560 - dynein cytoplasmic 1 intermediate chain 1
	COPS2 Gene (Entity type)	ENSG00000166200 - COP9 signalosome subunit 2
	GBA3 Gene (Entity type)	ENSG00000249948 - glucosylceramidase beta 3 (gene/pseudogene)
	OAZ2 Gene (Entity type)	ENSG00000180304 - ornithine decarboxylase antizyme 2

MAP2K3

Gene (Entity type)

ENSG00000034152 - mitogen-activated protein kinase kinase 3

ASPA

Gene (Entity type)

ENSG00000108381 - aspartoacylase

TMEM140

Gene (Entity type)

ENSG00000146859 - transmembrane protein 140

SAR1A

Gene (Entity type)

ENSG00000079332 - secretion associated Ras related GTPase 1A

COL17A1

Gene (Entity type)

ENSG00000065618 - collagen type XVII alpha 1 chain

C1GALT1

Gene (Entity type)

ENSG00000106392 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

DYNC1I1

Gene (Entity type)

ENSG00000158560 - dynein cytoplasmic 1 intermediate chain 1

COPS2

Gene (Entity type)

ENSG00000166200 - COP9 signalosome subunit 2

GBA3

Gene (Entity type)

ENSG00000249948 - glucosylceramidase beta 3 (gene/pseudogene)

OAZ2

Gene (Entity type)

ENSG00000180304 - ornithine decarboxylase antizyme 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.