HPN Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with HPN Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with HPN Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with HPN Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with HPN Up.

Results found

Linked to

	Label	Description
	COX17 Gene (Entity type)	ENSG00000138495 - cytochrome c oxidase copper chaperone COX17
	ZNF32 Gene (Entity type)	ENSG00000169740 - zinc finger protein 32
	BBS4 Gene (Entity type)	ENSG00000140463 - Bardet-Biedl syndrome 4
	UFC1 Gene (Entity type)	ENSG00000143222 - ubiquitin-fold modifier conjugating enzyme 1
	LRRC19 Gene (Entity type)	ENSG00000184434 - leucine rich repeat containing 19
	HPF1 Gene (Entity type)	ENSG00000056050 - histone PARylation factor 1
	PRPSAP1 Gene (Entity type)	ENSG00000161542 - phosphoribosyl pyrophosphate synthetase associated protein 1
	NAE1 Gene (Entity type)	ENSG00000159593 - NEDD8 activating enzyme E1 subunit 1
	ANKRD49 Gene (Entity type)	ENSG00000168876 - ankyrin repeat domain 49
	ELP4 Gene (Entity type)	ENSG00000109911 - elongator acetyltransferase complex subunit 4

COX17

Gene (Entity type)

ENSG00000138495 - cytochrome c oxidase copper chaperone COX17

ZNF32

Gene (Entity type)

ENSG00000169740 - zinc finger protein 32

BBS4

Gene (Entity type)

ENSG00000140463 - Bardet-Biedl syndrome 4

UFC1

Gene (Entity type)

ENSG00000143222 - ubiquitin-fold modifier conjugating enzyme 1

LRRC19

Gene (Entity type)

ENSG00000184434 - leucine rich repeat containing 19

HPF1

Gene (Entity type)

ENSG00000056050 - histone PARylation factor 1

PRPSAP1

Gene (Entity type)

ENSG00000161542 - phosphoribosyl pyrophosphate synthetase associated protein 1

NAE1

Gene (Entity type)

ENSG00000159593 - NEDD8 activating enzyme E1 subunit 1

ANKRD49

Gene (Entity type)

ENSG00000168876 - ankyrin repeat domain 49

ELP4

Gene (Entity type)

ENSG00000109911 - elongator acetyltransferase complex subunit 4

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.