GSE85880 GSE85881 tretinoin cardiac muscle cell 4 v 1 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_1_human_up.

Results found

Linked to

	Label	Description
	NBPF8 Gene (Entity type)	ENSG00000270231 - NBPF member 8
	GOLGA2P7 Gene (Entity type)	ENSG00000290689 - GOLGA2 pseudogene 7
	PPP2R3B Gene (Entity type)	ENSG00000292327 - protein phosphatase 2 regulatory subunit B''beta
	NBPF26 Gene (Entity type)	ENSG00000273136 - NBPF member 26
	PURPL Gene (Entity type)	ENSG00000250337 - p53 upregulated regulator of p53 levels
	HAGLR Gene (Entity type)	ENSG00000224189 - HOXD antisense growth-associated long non-coding RNA
	HOTAIRM1 Gene (Entity type)	ENSG00000233429 - HOXA transcript antisense RNA, myeloid-specific 1
	DLEU2 Gene (Entity type)	ENSG00000231607 - deleted in lymphocytic leukemia 2
	PCBP1-AS1 Gene (Entity type)	ENSG00000293616 - PCBP1 antisense RNA 1
	GOLGA2P5 Gene (Entity type)	ENSG00000290576 - GOLGA2 pseudogene 5

NBPF8

Gene (Entity type)

ENSG00000270231 - NBPF member 8

GOLGA2P7

Gene (Entity type)

ENSG00000290689 - GOLGA2 pseudogene 7

PPP2R3B

Gene (Entity type)

ENSG00000292327 - protein phosphatase 2 regulatory subunit B''beta

NBPF26

Gene (Entity type)

ENSG00000273136 - NBPF member 26

PURPL

Gene (Entity type)

ENSG00000250337 - p53 upregulated regulator of p53 levels

HAGLR

Gene (Entity type)

ENSG00000224189 - HOXD antisense growth-associated long non-coding RNA

HOTAIRM1

Gene (Entity type)

ENSG00000233429 - HOXA transcript antisense RNA, myeloid-specific 1

DLEU2

Gene (Entity type)

ENSG00000231607 - deleted in lymphocytic leukemia 2

PCBP1-AS1

Gene (Entity type)

ENSG00000293616 - PCBP1 antisense RNA 1

GOLGA2P5

Gene (Entity type)

ENSG00000290576 - GOLGA2 pseudogene 5

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.