SCML1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SCML1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SCML1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SCML1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SCML1 Up.

Results found

Linked to

	Label	Description
	COL17A1 Gene (Entity type)	ENSG00000065618 - collagen type XVII alpha 1 chain
	HAUS3 Gene (Entity type)	ENSG00000214367 - HAUS augmin like complex subunit 3
	RHOBTB2 Gene (Entity type)	ENSG00000008853 - Rho related BTB domain containing 2
	CD22 Gene (Entity type)	ENSG00000012124 - CD22 molecule
	ST3GAL4 Gene (Entity type)	ENSG00000110080 - ST3 beta-galactoside alpha-2,3-sialyltransferase 4
	RAMP3 Gene (Entity type)	ENSG00000122679 - receptor activity modifying protein 3
	NGF Gene (Entity type)	ENSG00000134259 - nerve growth factor

COL17A1

Gene (Entity type)

ENSG00000065618 - collagen type XVII alpha 1 chain

HAUS3

Gene (Entity type)

ENSG00000214367 - HAUS augmin like complex subunit 3

RHOBTB2

Gene (Entity type)

ENSG00000008853 - Rho related BTB domain containing 2

CD22

Gene (Entity type)

ENSG00000012124 - CD22 molecule

ST3GAL4

Gene (Entity type)

ENSG00000110080 - ST3 beta-galactoside alpha-2,3-sialyltransferase 4

RAMP3

Gene (Entity type)

ENSG00000122679 - receptor activity modifying protein 3

NGF

Gene (Entity type)

ENSG00000134259 - nerve growth factor

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.