CLC Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CLC Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CLC Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CLC Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CLC Up.

Results found

Linked to

	Label	Description
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	HIPK1 Gene (Entity type)	ENSG00000163349 - homeodomain interacting protein kinase 1
	IL20RA Gene (Entity type)	ENSG00000016402 - interleukin 20 receptor subunit alpha
	VTN Gene (Entity type)	ENSG00000109072 - vitronectin
	HIGD2A Gene (Entity type)	ENSG00000146066 - HIG1 hypoxia inducible domain family member 2A
	POF1B Gene (Entity type)	ENSG00000124429 - POF1B actin binding protein
	CDSN Gene (Entity type)	ENSG00000204539 - corneodesmosin
	LSM8 Gene (Entity type)	ENSG00000128534 - LSM8 homolog, U6 small nuclear RNA associated
	UBE2D1 Gene (Entity type)	ENSG00000072401 - ubiquitin conjugating enzyme E2 D1
	PPT2 Gene (Entity type)	ENSG00000221988 - palmitoyl-protein thioesterase 2

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

HIPK1

Gene (Entity type)

ENSG00000163349 - homeodomain interacting protein kinase 1

IL20RA

Gene (Entity type)

ENSG00000016402 - interleukin 20 receptor subunit alpha

VTN

Gene (Entity type)

ENSG00000109072 - vitronectin

HIGD2A

Gene (Entity type)

ENSG00000146066 - HIG1 hypoxia inducible domain family member 2A

POF1B

Gene (Entity type)

ENSG00000124429 - POF1B actin binding protein

CDSN

Gene (Entity type)

ENSG00000204539 - corneodesmosin

LSM8

Gene (Entity type)

ENSG00000128534 - LSM8 homolog, U6 small nuclear RNA associated

UBE2D1

Gene (Entity type)

ENSG00000072401 - ubiquitin conjugating enzyme E2 D1

PPT2

Gene (Entity type)

ENSG00000221988 - palmitoyl-protein thioesterase 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.